STRINGSTRING
ydjX ydjX ydjY ydjY ydjZ ydjZ ynjB ynjB ynjC ynjC ynjD ynjD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ydjXTVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family. (236 aa)
ydjYPutative ferrodoxin-like lipoprotein. (225 aa)
ydjZTVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family. (235 aa)
ynjBPutative ABC transporter periplasmic binding protein. (388 aa)
ynjCPutative ABC transporter permease; Probably part of the binding-protein-dependent transport system YnjCD. Probably responsible for the translocation of the substrate across the membrane. (511 aa)
ynjDPutative ABC transporter ATPase; Probably part of a binding-protein-dependent transport system YnjCD. Probably responsible for energy coupling to the transport system. (217 aa)
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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