STRINGSTRING
yahD yahD yahE yahE yahF yahF yahG yahG yahJ yahJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yahDAnkyrin repeat protein; Putative transcription factor. (201 aa)
yahEDUF2877 family protein. (287 aa)
yahFPutative NAD(P)-binding succinyl-CoA synthase; Putative oxidoreductase subunit; To E.coli FdrA and some, to bacterial SucD. (515 aa)
yahGDUF1116 family protein. (472 aa)
yahJPutative metallo-dependent hydrolase domain deaminase; Putative deaminase; Protein involved in amine catabolic process. (460 aa)
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.