STRINGSTRING
insB1 insB1 insA insA ykfA ykfA insH1 insH1 insB1-2 insB1-2 insA-2 insA-2 insB1-3 insB1-3 insA-3 insA-3 yajD yajD insH1-2 insH1-2 insH1-3 insH1-3 insB1-4 insB1-4 ychN ychN ychO ychO insH1-4 insH1-4 insH1-5 insH1-5 insB1-5 insB1-5 insA-4 insA-4 insH1-6 insH1-6 insH1-7 insH1-7 insH1-8 insH1-8 insH1-9 insH1-9 insH1-10 insH1-10 insA-5 insA-5 insB1-6 insB1-6 insH1-11 insH1-11 insA-6 insA-6 insA-7 insA-7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
insB1IS1 transposase B; Absolutely required for transposition of IS1. (167 aa)
insAIS1 repressor TnpA; Absolutely required for transposition of IS1. (91 aa)
ykfACP4-6 prophage; Putative GTP-binding protein; To E.coli YfjP and YeeP. (287 aa)
insH1Transposase InsH for insertion sequence element IS5R; Involved in the transposition of the insertion sequence IS5. (338 aa)
insB1-2Insertion element IS1 2 protein InsB; Absolutely required for transposition of IS1. (167 aa)
insA-2IS1 repressor TnpA; Absolutely required for transposition of IS1. (91 aa)
insB1-3Pseudogene. (167 aa)
insA-3IS1 repressor TnpA. (91 aa)
yajDHNH nuclease family protein; Belongs to the HNH nuclease family. (115 aa)
insH1-2DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage. (338 aa)
insH1-3IS5 transposase and trans-activator. (338 aa)
insB1-4IS1 transposase B; Absolutely required for transposition of IS1. (167 aa)
ychNPutative sulfur relay protein. (117 aa)
ychOConserved protein, invasin-like. (464 aa)
insH1-4IS5 transposase and trans-activator. (338 aa)
insH1-5Transposase InsH for insertion sequence element IS5Y; Involved in the transposition of the insertion sequence IS5. (326 aa)
insB1-5IS1 transposase B. (167 aa)
insA-4IS1 repressor TnpA. (91 aa)
insH1-6Transposase InsH for insertion sequence element IS5H; Involved in the transposition of the insertion sequence IS5. (338 aa)
insH1-7Pseudogene, lipopolysaccharide biosynthesis protein. (338 aa)
insH1-8Pseudogene, autotransporter outer membrane homology;putative transport; Not classified; putative ATP-binding component of a transport system. (338 aa)
insH1-9Pseudogene, IS-interrupted. (338 aa)
insH1-10Pseudogene fragment; interrupted by IS5. (338 aa)
insA-5Pseudogene, interrupted by IS1E. (91 aa)
insB1-6IS1 transposase B. (167 aa)
insH1-11Pseudogene. (338 aa)
insA-6IS1 repressor TnpA; Absolutely required for transposition of IS1. (91 aa)
insA-7IS1 repressor TnpA. (91 aa)
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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