STRINGSTRING
ybdM ybdM ybdN ybdN ybdO ybdO ycfZ ycfZ ymfA ymfA ydfV ydfV yejG yejG yqiI yqiI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ybdMSpo0J family protein, ParB-like nuclease domain. (209 aa)
ybdNPAPS reductase-like domain protein. (406 aa)
ybdOPutative transcriptional regulator LYSR-type; Protein involved in transcription and regulation of transcription, DNA-dependent; Belongs to the LysR transcriptional regulatory family. (300 aa)
ycfZInner membrane protein. (262 aa)
ymfADUF3592 family inner membrane protein. (153 aa)
ydfVQin prophage; uncharacterized protein. (101 aa)
yejGUncharacterized protein. (114 aa)
yqiIFimbrial protein; May be involved in a fimbrial system chaperoned by YqiH and exported by YqiG. (354 aa)
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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