STRINGSTRING
ydcA ydcA ydcD ydcD ydgC ydgC dsrB dsrB yjiC yjiC yjiL yjiL yjiM yjiM yjiN yjiN yciZ yciZ yjbT yjbT
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ydcAPutative periplasmic protein. (57 aa)
ydcDUncharacterized protein YdcD; Pseudogene, Rhs family. (160 aa)
ydgCGlpM family inner membrane protein. (111 aa)
dsrBUncharacterized protein. (62 aa)
yjiCUncharacterized protein; To E.coli YjfZ. (276 aa)
yjiLPutative ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase; Putative enzyme. (255 aa)
yjiMPutative 2-hydroxyglutaryl-CoA dehydratase; Belongs to the FldB/FldC dehydratase alpha/beta subunit family. (383 aa)
yjiNZinc-type alcohol dehydrogenase-like protein. (426 aa)
yciZUncharacterized protein. (57 aa)
yjbTPutative periplasmic protein; Belongs to the YjbT family. (92 aa)
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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