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yaeI yaeI yafT yafT ybbC ybbC insL1-2 insL1-2 cspH cspH cspG cspG ymcE ymcE ynfN ynfN cspI cspI rzpQ rzpQ rrrQ rrrQ ydfR ydfR essQ essQ cspB cspB cspF cspF quuQ quuQ rem rem flxA flxA gnsA gnsA rzoQ rzoQ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yaeIPhosphodiesterase with model substrate bis-pNPP; Shows phosphodiesterase activity, hydrolyzing phosphodiester bond in the artificial chromogenic substrate bis-p-nitrophenyl phosphate (bis-pNPP); Belongs to the metallophosphoesterase superfamily. (270 aa)
yafTLipoprotein; Putative aminopeptidase. (261 aa)
ybbCPutative immunity protein. (122 aa)
insL1-2IS186 transposase. (370 aa)
cspHStress protein, member of the CspA-family; Cold shock-like protein; Protein involved in response to temperature stimulus. (70 aa)
cspGHomolog of Salmonella cold shock protein; Protein involved in response to temperature stimulus. (70 aa)
ymcECold shock gene; Suppresses fabA and ts growth mutation. (76 aa)
ynfNQin prophage; cold shock-induced protein. (51 aa)
cspIQin prophage; Cold shock-like protein. (70 aa)
rzpQRz-like protein, Qin prophage; Completely contained in another CDS. (165 aa)
rrrQQin prophage; Essential for lysis of bacterial cell wall, by showing cell wall hydrolyzing activity; Belongs to the glycosyl hydrolase 24 family. (177 aa)
ydfRQin prophage; uncharacterized protein. (103 aa)
essQQin prophage; putative S lysis protein; Belongs to the lambda phage S protein family. (71 aa)
cspBQin prophage; cold shock protein. (71 aa)
cspFQin prophage; cold shock protein. (70 aa)
quuQQin prophage; Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes (By similarity). (250 aa)
remQin prophage; uncharacterized protein. (83 aa)
flxAQin prophage; uncharacterized protein. (110 aa)
gnsAPutative phosphatidylethanolamine synthesis regulator; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation; Belongs to the gns family. (57 aa)
rzoQPutative Rz1-like lipoprotein, Qin prophage; Completely contained in another CDS. (84 aa)
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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