STRINGSTRING
yagK yagK yagL yagL yagM yagM yagN yagN yffL yffL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yagKCP4-6 prophage; uncharacterized protein;Phage or Prophage Related; To E.coli YfjJ. (208 aa)
yagLCP4-6 prophage; DNA-binding protein. (232 aa)
yagMCP4-6 prophage; uncharacterized protein. (284 aa)
yagNCP4-6 prophage; uncharacterized protein. (146 aa)
yffLCPZ-55 prophage; uncharacterized protein. (213 aa)
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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