STRINGSTRING
yadV yadV fimC fimC yhcA yhcA yraI yraI yqiH yqiH yfcS yfcS yehC yehC ycbF ycbF elfD elfD ybgP ybgP sfmC sfmC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yadVPutative periplasmic pilin chaperone; Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches. (246 aa)
fimCPeriplasmic chaperone; Required for the biogenesis of type 1 fimbriae. Binds and interact with FimH. (241 aa)
yhcAPutative periplasmic chaperone protein; Could be required for the biogenesis of a putative fimbria. Belongs to the periplasmic pilus chaperone family. (224 aa)
yraIPutative periplasmic pilin chaperone; Part of the yraHIJK fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches. Increases adhesion to eukaryotic T24 bladder epithelial cells in the absence of fim operon. (231 aa)
yqiHPutative periplasmic pilin chaperone; Could be required for the biogenesis of a putative fimbria. Belongs to the periplasmic pilus chaperone family. (249 aa)
yfcSPutative periplasmic pilin chaperone; Part of the yfcOPQRSUV fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches. Increases adhesion to eukaryotic T24 bladder epithelial cells in the absence of fim genes. (250 aa)
yehCPutative periplasmic pilin chaperone; Part of the yehABCD fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches. (239 aa)
ycbFPutative periplasmic pilin chaperone; Part of the elfADCG-ycbUVF fimbrial operon, which promotes adhesion of bacteria to different abiotic surfaces. Could be required for the biogenesis of fimbriae; Belongs to the periplasmic pilus chaperone family. (236 aa)
elfDPutative periplasmic pilin chaperone; Part of the elfADCG-ycbUVF fimbrial operon, which promotes adhesion of bacteria to different abiotic surfaces. Could be required for the biogenesis of the ElfA fimbriae; Belongs to the periplasmic pilus chaperone family. (233 aa)
ybgPPutative periplasmic pilin chaperone; Could be required for the biogenesis of the putative YbgD fimbria; Belongs to the periplasmic pilus chaperone family. (242 aa)
sfmCPutative periplasmic pilus chaperone; Part of the sfmACDHF fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches. Increases adhesion to eukaryotic T24 bladder epithelial cells in the absence of fim genes. (230 aa)
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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