Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ccmA | ccmB | b2201 | b2200 | Heme export ABC transporter ATPase; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. | Heme export ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | 0.999 |
| ccmA | ccmC | b2201 | b2199 | Heme export ABC transporter ATPase; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. | Heme export ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | 0.999 |
| ccmA | ccmD | b2201 | b2198 | Heme export ABC transporter ATPase; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. | Cytochrome c biogenesis protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | 0.999 |
| ccmA | ccmE | b2201 | b2197 | Heme export ABC transporter ATPase; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. | Periplasmic heme chaperone; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH; Belongs to the CcmE/CycJ family. | 0.998 |
| ccmA | ccmF | b2201 | b2196 | Heme export ABC transporter ATPase; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. | Heme lyase, CcmF subunit; Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase. | 0.992 |
| ccmA | dsbA | b2201 | b3860 | Heme export ABC transporter ATPase; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. | Periplasmic protein disulfide isomerase I; Required for disulfide bond formation in some periplasmic proteins such as PhoA or OmpA. Acts by transferring its disulfide bond to other proteins and is reduced in the process. DsbA is reoxidized by DsbB. Required for pilus biogenesis. PhoP-regulated transcription is redox-sensitive, being activated when the periplasm becomes more reducing (deletion of dsbA/dsbB, treatment with dithiothreitol). MgrB acts between DsbA/DsbB and PhoP/PhoQ in this pathway. Belongs to the thioredoxin family. DsbA subfamily. | 0.608 |
| ccmA | dsbB | b2201 | b1185 | Heme export ABC transporter ATPase; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. | Oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I; Required for disulfide bond formation in some periplasmic proteins such as PhoA or OmpA. Acts by oxidizing the DsbA protein. PhoP-regulated transcription is redox-sensitive, being activated when the periplasm becomes more reducing (deletion of dsbA/dsbB, treatment with dithiothreitol). MgrB acts between DsbA/DsbB and PhoP/PhoQ in this pathway. | 0.574 |
| ccmB | ccmA | b2200 | b2201 | Heme export ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | Heme export ABC transporter ATPase; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. | 0.999 |
| ccmB | ccmC | b2200 | b2199 | Heme export ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | Heme export ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | 0.999 |
| ccmB | ccmD | b2200 | b2198 | Heme export ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | Cytochrome c biogenesis protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | 0.999 |
| ccmB | ccmE | b2200 | b2197 | Heme export ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | Periplasmic heme chaperone; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH; Belongs to the CcmE/CycJ family. | 0.999 |
| ccmB | ccmF | b2200 | b2196 | Heme export ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | Heme lyase, CcmF subunit; Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase. | 0.993 |
| ccmC | ccmA | b2199 | b2201 | Heme export ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | Heme export ABC transporter ATPase; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. | 0.999 |
| ccmC | ccmB | b2199 | b2200 | Heme export ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | Heme export ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | 0.999 |
| ccmC | ccmD | b2199 | b2198 | Heme export ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | Cytochrome c biogenesis protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | 0.999 |
| ccmC | ccmE | b2199 | b2197 | Heme export ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | Periplasmic heme chaperone; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH; Belongs to the CcmE/CycJ family. | 0.999 |
| ccmC | ccmF | b2199 | b2196 | Heme export ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | Heme lyase, CcmF subunit; Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase. | 0.998 |
| ccmC | dsbB | b2199 | b1185 | Heme export ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | Oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I; Required for disulfide bond formation in some periplasmic proteins such as PhoA or OmpA. Acts by oxidizing the DsbA protein. PhoP-regulated transcription is redox-sensitive, being activated when the periplasm becomes more reducing (deletion of dsbA/dsbB, treatment with dithiothreitol). MgrB acts between DsbA/DsbB and PhoP/PhoQ in this pathway. | 0.469 |
| ccmD | ccmA | b2198 | b2201 | Cytochrome c biogenesis protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | Heme export ABC transporter ATPase; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. | 0.999 |
| ccmD | ccmB | b2198 | b2200 | Cytochrome c biogenesis protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | Heme export ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes. | 0.999 |
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