Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| efeB | phoH | b1019 | b1020 | Deferrrochelatase, periplasmic; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Also displays peroxidase activity on guaiacol in vitro. | PhoB-dependent, ATP-binding pho regulon component; may be helicase; induced by P starvation; Protein involved in phosphorus metabolic process and response to starvation; Belongs to the PhoH family. | 0.598 |
| efeB | ycdU | b1019 | b1029 | Deferrrochelatase, periplasmic; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Also displays peroxidase activity on guaiacol in vitro. | Uncharacterized protein YcdU; Pseudogene. | 0.508 |
| feaB | feaR | b1385 | b1384 | Phenylacetaldehyde dehydrogenase; Acts almost equally well on phenylacetaldehyde, 4- hydroxyphenylacetaldehyde and 3,4-dihydroxyphenylacetaldehyde. | Transcriptional activator for tynA and feaB; Positive regulator of tynA/maoA and feaB/padA, the genes for 2-phenylethylamine catabolism. | 0.959 |
| feaB | paaA | b1385 | b1388 | Phenylacetaldehyde dehydrogenase; Acts almost equally well on phenylacetaldehyde, 4- hydroxyphenylacetaldehyde and 3,4-dihydroxyphenylacetaldehyde. | Ring 1,2-phenylacetyl-CoA epoxidase subunit; Component of 1,2-phenylacetyl-CoA epoxidase multicomponent enzyme system which catalyzes the reduction of phenylacetyl-CoA (PA- CoA) to form 1,2-epoxyphenylacetyl-CoA. The subunit A is the catalytic subunit involved in the incorporation of one atom of molecular oxygen into phenylacetyl-CoA. | 0.446 |
| feaB | paaK | b1385 | b1398 | Phenylacetaldehyde dehydrogenase; Acts almost equally well on phenylacetaldehyde, 4- hydroxyphenylacetaldehyde and 3,4-dihydroxyphenylacetaldehyde. | phenylacetyl-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.942 |
| feaB | tynA | b1385 | b1386 | Phenylacetaldehyde dehydrogenase; Acts almost equally well on phenylacetaldehyde, 4- hydroxyphenylacetaldehyde and 3,4-dihydroxyphenylacetaldehyde. | Tyramine oxidase, copper-requiring; The enzyme prefers aromatic over aliphatic amines; Belongs to the copper/topaquinone oxidase family. | 0.992 |
| feaR | feaB | b1384 | b1385 | Transcriptional activator for tynA and feaB; Positive regulator of tynA/maoA and feaB/padA, the genes for 2-phenylethylamine catabolism. | Phenylacetaldehyde dehydrogenase; Acts almost equally well on phenylacetaldehyde, 4- hydroxyphenylacetaldehyde and 3,4-dihydroxyphenylacetaldehyde. | 0.959 |
| feaR | paaK | b1384 | b1398 | Transcriptional activator for tynA and feaB; Positive regulator of tynA/maoA and feaB/padA, the genes for 2-phenylethylamine catabolism. | phenylacetyl-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.400 |
| feaR | tynA | b1384 | b1386 | Transcriptional activator for tynA and feaB; Positive regulator of tynA/maoA and feaB/padA, the genes for 2-phenylethylamine catabolism. | Tyramine oxidase, copper-requiring; The enzyme prefers aromatic over aliphatic amines; Belongs to the copper/topaquinone oxidase family. | 0.929 |
| feaR | ycdU | b1384 | b1029 | Transcriptional activator for tynA and feaB; Positive regulator of tynA/maoA and feaB/padA, the genes for 2-phenylethylamine catabolism. | Uncharacterized protein YcdU; Pseudogene. | 0.623 |
| ghrA | tynA | b1033 | b1386 | Glyoxylate/hydroxypyruvate reductase A; Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively. Inactive towards 2-oxo-D-gluconate, 2-oxoglutarate, oxaloacetate and pyruvate. Only D- and L-glycerate are involved in the oxidative activity with NADP. Activity with NAD is very low. | Tyramine oxidase, copper-requiring; The enzyme prefers aromatic over aliphatic amines; Belongs to the copper/topaquinone oxidase family. | 0.800 |
| ghrA | ycdU | b1033 | b1029 | Glyoxylate/hydroxypyruvate reductase A; Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively. Inactive towards 2-oxo-D-gluconate, 2-oxoglutarate, oxaloacetate and pyruvate. Only D- and L-glycerate are involved in the oxidative activity with NADP. Activity with NAD is very low. | Uncharacterized protein YcdU; Pseudogene. | 0.731 |
| insC1 | insC1-2 | b0360 | b1403 | Transposase InsC for insertion element IS2-10; Involved in the transposition of the insertion sequence IS2. | IS2 repressor TnpA. | 0.808 |
| insC1 | insC1-4 | b0360 | b2861 | Transposase InsC for insertion element IS2-10; Involved in the transposition of the insertion sequence IS2. | IS2 repressor TnpA. | 0.529 |
| insC1 | insC1-5 | b0360 | b3044 | Transposase InsC for insertion element IS2-10; Involved in the transposition of the insertion sequence IS2. | Pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein. | 0.503 |
| insC1 | insD1 | b0360 | b0361 | Transposase InsC for insertion element IS2-10; Involved in the transposition of the insertion sequence IS2. | IS2 transposase TnpB; Involved in the transposition of the insertion sequence IS2. | 0.984 |
| insC1 | insD1-2 | b0360 | b1402 | Transposase InsC for insertion element IS2-10; Involved in the transposition of the insertion sequence IS2. | Pseudogene, autotransporter homolog; interrupted by IS2 and IS30. | 0.958 |
| insC1 | insD1-3 | b0360 | b1996 | Transposase InsC for insertion element IS2-10; Involved in the transposition of the insertion sequence IS2. | CP4-44 prophage; putative disrupted hemin or colicin receptor;Phage or Prophage Related; interrupted by IS2 and C-terminal deletion. | 0.909 |
| insC1 | insD1-4 | b0360 | b2860 | Transposase InsC for insertion element IS2-10; Involved in the transposition of the insertion sequence IS2. | Pseudogene, orgA family, part of T3SS PAI ETT2 remnant. | 0.954 |
| insC1 | insD1-5 | b0360 | b3045 | Transposase InsC for insertion element IS2-10; Involved in the transposition of the insertion sequence IS2. | IS2 transposase TnpB. | 0.915 |
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