STRINGSTRING
bhsA bhsA yciG yciG ynaE ynaE ydfK ydfK cspI cspI cspB cspB cspF cspF cspC cspC cspA cspA ppiC ppiC yjbJ yjbJ ymdF ymdF cspG cspG cspH cspH cspD cspD ybgS ybgS cspE cspE hupB hupB yahO yahO
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bhsABiofilm, cell surface and signaling protein; Reduces the permeability of the outer membrane to copper. Seems to be involved in the regulation of biofilm formation. May decrease biofilm formation by repressing cell-cell interaction and cell surface interaction; Belongs to the BhsA/McbA family. (85 aa)
yciGKGG family protein; Belongs to the con-10 family. (59 aa)
ynaECold shock protein, Rac prophage. (77 aa)
ydfKCold shock protein YdfK; Cryptic prophage Qin/Kim. (77 aa)
cspIQin prophage; Cold shock-like protein. (70 aa)
cspBQin prophage; cold shock protein. (71 aa)
cspFQin prophage; cold shock protein. (70 aa)
cspCStress protein, member of the CspA-family; Cold shock protein; Protein involved in transcription activator activity, transcription and response to temperature stimulus. (69 aa)
cspARNA chaperone and antiterminator, cold-inducible; Binds to and stimulates the transcription of the CCAAT- containing, cold-shock-inducible promoters of the H-NS and GyrA proteins. Binds also to the inverted repeat 5'-ATTGG-3'. (70 aa)
ppiCPeptidyl-prolyl cis-trans isomerase C (rotamase C); PPIases accelerate the folding of proteins. It prefers amino acid residues with hydrophobic side chains like leucine and phenylalanine in the P1 position of the peptides substrates; Belongs to the PpiC/parvulin rotamase family. (93 aa)
yjbJStress-induced protein, UPF0337 family; Belongs to the UPF0337 (CsbD) family. (69 aa)
ymdFKGG family protein; Belongs to the con-10 family. (57 aa)
cspGHomolog of Salmonella cold shock protein; Protein involved in response to temperature stimulus. (70 aa)
cspHStress protein, member of the CspA-family; Cold shock-like protein; Protein involved in response to temperature stimulus. (70 aa)
cspDInhibitor of DNA replication, cold shock protein homolog; Inhibits DNA replication at both initiation and elongation steps, most probably by binding to the opened, single-stranded regions at replication forks. Plays a regulatory role in chromosomal replication in nutrient-depleted cells. (74 aa)
ybgSPutative homeobox protein. (126 aa)
cspECold shock protein; Protein involved in transcription activator activity, transcription and response to temperature stimulus. (69 aa)
hupBHU, DNA-binding transcriptional regulator, beta subunit; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (90 aa)
yahOPeriplasmic protein, function unknown, YhcN family. (91 aa)
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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