Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cspA | cspG | b3556 | b0990 | RNA chaperone and antiterminator, cold-inducible; Binds to and stimulates the transcription of the CCAAT- containing, cold-shock-inducible promoters of the H-NS and GyrA proteins. Binds also to the inverted repeat 5'-ATTGG-3'. | Homolog of Salmonella cold shock protein; Protein involved in response to temperature stimulus. | 0.659 |
| cspA | ymcE | b3556 | b0991 | RNA chaperone and antiterminator, cold-inducible; Binds to and stimulates the transcription of the CCAAT- containing, cold-shock-inducible promoters of the H-NS and GyrA proteins. Binds also to the inverted repeat 5'-ATTGG-3'. | Cold shock gene; Suppresses fabA and ts growth mutation. | 0.822 |
| cspG | cspA | b0990 | b3556 | Homolog of Salmonella cold shock protein; Protein involved in response to temperature stimulus. | RNA chaperone and antiterminator, cold-inducible; Binds to and stimulates the transcription of the CCAAT- containing, cold-shock-inducible promoters of the H-NS and GyrA proteins. Binds also to the inverted repeat 5'-ATTGG-3'. | 0.659 |
| cspG | gnsA | b0990 | b4517 | Homolog of Salmonella cold shock protein; Protein involved in response to temperature stimulus. | Putative phosphatidylethanolamine synthesis regulator; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation; Belongs to the gns family. | 0.597 |
| cspG | ymcE | b0990 | b0991 | Homolog of Salmonella cold shock protein; Protein involved in response to temperature stimulus. | Cold shock gene; Suppresses fabA and ts growth mutation. | 0.777 |
| cspI | gnsB | b1552 | b1550 | Qin prophage; Cold shock-like protein. | Qin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation. | 0.400 |
| gnsA | cspG | b4517 | b0990 | Putative phosphatidylethanolamine synthesis regulator; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation; Belongs to the gns family. | Homolog of Salmonella cold shock protein; Protein involved in response to temperature stimulus. | 0.597 |
| gnsA | ymcE | b4517 | b0991 | Putative phosphatidylethanolamine synthesis regulator; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation; Belongs to the gns family. | Cold shock gene; Suppresses fabA and ts growth mutation. | 0.954 |
| gnsB | cspI | b1550 | b1552 | Qin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation. | Qin prophage; Cold shock-like protein. | 0.400 |
| gnsB | ymcE | b1550 | b0991 | Qin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation. | Cold shock gene; Suppresses fabA and ts growth mutation. | 0.408 |
| infC | pcnB | b1718 | b0143 | Translation initiation factor IF-3; One of the essential components for the initiation of protein synthesis.IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. | poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Rho-independent transcription terminators may serve as polyadenylation signals. Seems to be involved in plasmid copy number control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.463 |
| pcnB | infC | b0143 | b1718 | poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Rho-independent transcription terminators may serve as polyadenylation signals. Seems to be involved in plasmid copy number control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Translation initiation factor IF-3; One of the essential components for the initiation of protein synthesis.IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. | 0.463 |
| ymcE | cspA | b0991 | b3556 | Cold shock gene; Suppresses fabA and ts growth mutation. | RNA chaperone and antiterminator, cold-inducible; Binds to and stimulates the transcription of the CCAAT- containing, cold-shock-inducible promoters of the H-NS and GyrA proteins. Binds also to the inverted repeat 5'-ATTGG-3'. | 0.822 |
| ymcE | cspG | b0991 | b0990 | Cold shock gene; Suppresses fabA and ts growth mutation. | Homolog of Salmonella cold shock protein; Protein involved in response to temperature stimulus. | 0.777 |
| ymcE | gnsA | b0991 | b4517 | Cold shock gene; Suppresses fabA and ts growth mutation. | Putative phosphatidylethanolamine synthesis regulator; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation; Belongs to the gns family. | 0.954 |
| ymcE | gnsB | b0991 | b1550 | Cold shock gene; Suppresses fabA and ts growth mutation. | Qin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation. | 0.408 |