STRINGSTRING
fabR fabR insD1 insD1 ycbJ ycbJ insD1-2 insD1-2 insD1-3 insD1-3 insD1-4 insD1-4 insD1-5 insD1-5 waaR waaR insD1-6 insD1-6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fabRTranscriptional repressor of fabA and fabB; Binds the promoter region of at least fabA and fabB, but probably not yqfA. Represses the transcription of fabA and fabB, involved in unsaturated fatty acid (UFA) biosynthesis. By controlling UFA production, FabR directly influences the physical properties of the membrane bilayer. (215 aa)
insD1IS2 transposase TnpB; Involved in the transposition of the insertion sequence IS2. (301 aa)
ycbJProtein kinase-like domain protein. (297 aa)
insD1-2Pseudogene, autotransporter homolog; interrupted by IS2 and IS30. (301 aa)
insD1-3CP4-44 prophage; putative disrupted hemin or colicin receptor;Phage or Prophage Related; interrupted by IS2 and C-terminal deletion. (301 aa)
insD1-4Pseudogene, orgA family, part of T3SS PAI ETT2 remnant. (301 aa)
insD1-5IS2 transposase TnpB. (301 aa)
waaRLipopolysaccharide 1,2-glucosyltransferase; Adds the glucose(II) group on the galactose(I) group of LPS. (338 aa)
insD1-6IS2 transposase TnpB. (301 aa)
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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