15 items (Juglans regia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108981244	Uncharacterized protein LOC108981244 isoform X1. (468 aa)
	LOC108985278	DNA ligase 1-like isoform X1. (602 aa)
	LOC108994452	Myb-like protein X. (604 aa)
	LOC108995256	ATP-dependent DNA helicase DDM1 isoform X1. (766 aa)
	LOC108995378	Uncharacterized protein LOC108995378. (479 aa)
	LOC108997572	Uncharacterized protein LOC108997572. (480 aa)
	LOC109002751	Uncharacterized protein LOC109002751 isoform X1. (465 aa)
	LOC109003702	Uncharacterized protein LOC109003702. (480 aa)
	LOC109011550	Uncharacterized protein LOC109011550. (476 aa)
	LOC109012253	Uncharacterized protein LOC109012253. (475 aa)
	LOC109012763	DDT domain-containing protein DDB_G0282237-like isoform X1. (735 aa)
	LOC109014116	Protein starmaker-like isoform X1. (598 aa)
	LOC109019080	PHD finger protein EHD3-like. (346 aa)
	LOC109019079	PHD finger protein EHD3-like isoform X1. (621 aa)
	LOC109020089	Uncharacterized protein LOC109020089 isoform X1. (470 aa)

Your Current Organism:

Juglans regia

NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108981244	LOC108985278	A0A2I4DL59	A0A2I4E0Y3	Uncharacterized protein LOC108981244 isoform X1.	DNA ligase 1-like isoform X1.	0.475
LOC108981244	LOC108994452	A0A2I4DL59	A0A2I4F0Q3	Uncharacterized protein LOC108981244 isoform X1.	Myb-like protein X.	0.475
LOC108981244	LOC108995378	A0A2I4DL59	A0A2I4F4D6	Uncharacterized protein LOC108981244 isoform X1.	Uncharacterized protein LOC108995378.	0.555
LOC108981244	LOC108997572	A0A2I4DL59	A0A2I4FCT0	Uncharacterized protein LOC108981244 isoform X1.	Uncharacterized protein LOC108997572.	0.555
LOC108981244	LOC109002751	A0A2I4DL59	A0A2I4FX01	Uncharacterized protein LOC108981244 isoform X1.	Uncharacterized protein LOC109002751 isoform X1.	0.544
LOC108981244	LOC109003702	A0A2I4DL59	A0A2I4G0T2	Uncharacterized protein LOC108981244 isoform X1.	Uncharacterized protein LOC109003702.	0.556
LOC108981244	LOC109011550	A0A2I4DL59	A0A2I4GWT4	Uncharacterized protein LOC108981244 isoform X1.	Uncharacterized protein LOC109011550.	0.567
LOC108981244	LOC109012253	A0A2I4DL59	A0A2I4GZL5	Uncharacterized protein LOC108981244 isoform X1.	Uncharacterized protein LOC109012253.	0.555
LOC108981244	LOC109012763	A0A2I4DL59	A0A2I4H1S4	Uncharacterized protein LOC108981244 isoform X1.	DDT domain-containing protein DDB_G0282237-like isoform X1.	0.766
LOC108981244	LOC109014116	A0A2I4DL59	A0A2I4H766	Uncharacterized protein LOC108981244 isoform X1.	Protein starmaker-like isoform X1.	0.475
LOC108981244	LOC109019079	A0A2I4DL59	A0A2I4HL73	Uncharacterized protein LOC108981244 isoform X1.	PHD finger protein EHD3-like isoform X1.	0.766
LOC108981244	LOC109019080	A0A2I4DL59	A0A2I4HL09	Uncharacterized protein LOC108981244 isoform X1.	PHD finger protein EHD3-like.	0.766
LOC108981244	LOC109020089	A0A2I4DL59	A0A2I4HPI1	Uncharacterized protein LOC108981244 isoform X1.	Uncharacterized protein LOC109020089 isoform X1.	0.563
LOC108985278	LOC108981244	A0A2I4E0Y3	A0A2I4DL59	DNA ligase 1-like isoform X1.	Uncharacterized protein LOC108981244 isoform X1.	0.475
LOC108985278	LOC108995256	A0A2I4E0Y3	A0A2I4F3V3	DNA ligase 1-like isoform X1.	ATP-dependent DNA helicase DDM1 isoform X1.	0.475
LOC108985278	LOC108995378	A0A2I4E0Y3	A0A2I4F4D6	DNA ligase 1-like isoform X1.	Uncharacterized protein LOC108995378.	0.475
LOC108985278	LOC108997572	A0A2I4E0Y3	A0A2I4FCT0	DNA ligase 1-like isoform X1.	Uncharacterized protein LOC108997572.	0.475
LOC108985278	LOC109002751	A0A2I4E0Y3	A0A2I4FX01	DNA ligase 1-like isoform X1.	Uncharacterized protein LOC109002751 isoform X1.	0.475
LOC108985278	LOC109003702	A0A2I4E0Y3	A0A2I4G0T2	DNA ligase 1-like isoform X1.	Uncharacterized protein LOC109003702.	0.475
LOC108985278	LOC109011550	A0A2I4E0Y3	A0A2I4GWT4	DNA ligase 1-like isoform X1.	Uncharacterized protein LOC109011550.	0.475