STRINGSTRING
LOC108981771 LOC108981771 LOC108982270 LOC108982270 LOC108986455 LOC108986455 LOC108988299 LOC108988299 LOC108988344 LOC108988344 LOC108988899 LOC108988899 LOC108989628 LOC108989628 LOC108990074 LOC108990074 LOC108992626 LOC108992626 LOC108994511 LOC108994511 LOC108994695 LOC108994695 LOC108995067 LOC108995067 LOC108997135 LOC108997135 LOC108998713 LOC108998713 LOC108999712 LOC108999712 LOC109001457 LOC109001457 LOC109001766 LOC109001766 LOC109003354 LOC109003354 LOC109004025 LOC109004025 LOC109005200 LOC109005200 LOC109005352 LOC109005352 LOC109007051 LOC109007051 LOC109009453 LOC109009453 LOC109013418 LOC109013418 LOC109013429 LOC109013429 LOC109013530 LOC109013530 LOC109013798 LOC109013798 LOC109014487 LOC109014487 LOC109015031 LOC109015031 LOC109017451 LOC109017451 LOC109021655 LOC109021655 LOC109021792 LOC109021792
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108981771Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (674 aa)
LOC108982270Probable rRNA-processing protein EBP2 homolog. (299 aa)
LOC108986455Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (434 aa)
LOC108988299Probable ribosome biogenesis protein RLP24. (167 aa)
LOC108988344Ribosomal L1 domain-containing protein 1-like. (428 aa)
LOC108988899Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (732 aa)
LOC108989628Nucleolar GTP-binding protein 1 isoform X1. (461 aa)
LOC108990074Uncharacterized protein LOC108990074. (136 aa)
LOC108992626WD repeat-containing protein DDB_G0290555. (455 aa)
LOC108994511Nucleolar complex protein 2 homolog. (727 aa)
LOC10899469560S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
LOC10899506760S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
LOC108997135Nucleolar complex protein 2 homolog. (728 aa)
LOC108998713Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (674 aa)
LOC108999712Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (813 aa)
LOC109001457Ribosome production factor 1. (365 aa)
LOC109001766Nucleolar complex protein 3 homolog. (845 aa)
LOC109003354DAR GTPase 3, chloroplastic isoform X1. (369 aa)
LOC109004025MKI67 FHA domain-interacting nucleolar phosphoprotein-like. (125 aa)
LOC109005200Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (340 aa)
LOC109005352Ribosomal L1 domain-containing protein 1-like. (426 aa)
LOC109007051Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (226 aa)
LOC109009453Ribosomal RNA processing protein 1 homolog A-like. (564 aa)
LOC109013418Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (229 aa)
LOC109013429Ribosome biogenesis protein BRX1-like. (313 aa)
LOC109013530Ribosome biogenesis protein NSA2 homolog. (260 aa)
LOC109013798Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (834 aa)
LOC109014487Protein MAK16 homolog; Belongs to the MAK16 family. (301 aa)
LOC109015031Uncharacterized RNA-binding protein C1827.05c-like. (96 aa)
LOC109017451Pescadillo homolog. (362 aa)
LOC109021655Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (605 aa)
LOC109021792Probable ribosome biogenesis protein RLP24. (167 aa)
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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