61 items (Juglans regia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108988921	Regulator of nonsense transcripts UPF3-like isoform X1. (564 aa)
	LOC108979206	Transcription factor EGL1-like. (637 aa)
	LOC108980377	E3 ubiquitin ligase complex SCF subunit sconC-like; Belongs to the SKP1 family. (214 aa)
	LOC108981134	RING-box protein 1a. (118 aa)
	LOC108981321	Transcription factor EGL1-like. (656 aa)
	LOC108981334	Protein trichome birefringence-like 39. (369 aa)
	LOC108981543	Ethylene-responsive transcription factor 1B-like. (219 aa)
	LOC108982669	SKP1-like protein 21. (160 aa)
	LOC108983721	Regulator of nonsense transcripts UPF3-like isoform X1. (533 aa)
	LOC108985138	Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3. (338 aa)
	LOC108986652	Ninja-family protein mc410. (491 aa)
	LOC108988395	Regulatory protein NPR5 isoform X1. (490 aa)
	LOC108990536	SKP1-like protein 1B; Belongs to the SKP1 family. (155 aa)
	LOC108990873	SKP1-like protein 21; Belongs to the SKP1 family. (308 aa)
	LOC108992402	Protein GRIM REAPER. (159 aa)
	LOC108992523	Ubiquitin carboxyl-terminal hydrolase 12-like. (531 aa)
	LOC108992780	Myb-related protein 305-like isoform X1. (204 aa)
	LOC108994060	KH domain-containing protein HEN4. (664 aa)
	LOC108995250	Cytochrome P450 90B1-like; Belongs to the cytochrome P450 family. (493 aa)
	LOC108996333	E3 ubiquitin-protein ligase RGLG1-like. (414 aa)
	LOC108997084	Regulator of nonsense transcripts UPF2. (1195 aa)
	LOC108997500	Cytochrome P450 90B1-like; Belongs to the cytochrome P450 family. (491 aa)
	LOC108998369	Protein trichome birefringence-like 38. (364 aa)
	LOC108998494	Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family. (98 aa)
	LOC109000465	Protein trichome birefringence-like 39. (365 aa)
	LOC109000550	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RGLG2. (427 aa)
	LOC109001987	LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 12b-like. (652 aa)
	LOC109002041	SKP1-like protein 21 isoform X1; Belongs to the SKP1 family. (398 aa)
	LOC109002616	Mediator of RNA polymerase II transcription subunit 25. (865 aa)
	LOC109004429	Protein trichome birefringence-like 38. (365 aa)
	LOC109004811	E3 ubiquitin-protein ligase RGLG1-like isoform X1. (442 aa)
	LOC109005134	Ethylene-responsive transcription factor 2-like. (289 aa)
	LOC109005773	Protein trichome birefringence-like 41. (321 aa)
	LOC109005972	Protein trichome birefringence-like 41 isoform X1. (373 aa)
	LOC109006175	Uncharacterized protein LOC109006175. (304 aa)
	LOC109006217	Regulator of nonsense transcripts UPF3-like. (489 aa)
	LOC109006992	SKP1-like protein 1A; Belongs to the SKP1 family. (153 aa)
	LOC109007057	Ethylene-responsive transcription factor 1B. (241 aa)
	LOC109007236	Mitogen-activated protein kinase kinase 3. (522 aa)
	LOC109008403	Regulatory protein NPR5-like. (489 aa)
	LOC109009026	RING-box protein 1a-like. (118 aa)
	LOC109010437	SKP1-like protein 1B; Belongs to the SKP1 family. (157 aa)
	LOC109010644	E3 ubiquitin-protein ligase RGLG1-like. (158 aa)
	LOC109011235	SKP1-like protein 1B; Belongs to the SKP1 family. (157 aa)
	LOC109011265	E3 ubiquitin ligase complex SCF subunit sconC-like; Belongs to the SKP1 family. (214 aa)
	LOC109011452	Regulator of nonsense transcripts 1 homolog isoform X1. (1286 aa)
	LOC109011455	Regulator of nonsense transcripts 1 homolog. (1286 aa)
	LOC109011960	Ubiquitin carboxyl-terminal hydrolase 12-like; Belongs to the peptidase C19 family. (1527 aa)
	LOC109012025	Protein trichome birefringence-like 41 isoform X1. (379 aa)
	LOC109013487	Ubiquitin carboxyl-terminal hydrolase 12; Belongs to the peptidase C19 family. (1116 aa)
	LOC109013834	SKP1-like protein 11; Belongs to the SKP1 family. (160 aa)
	LOC109014163	Ubiquitin carboxyl-terminal hydrolase 12-like; Belongs to the peptidase C19 family. (1228 aa)
	LOC109014468	Transcription factor EGL1-like isoform X1. (632 aa)
	LOC109015246	Ubiquitin carboxyl-terminal hydrolase 12-like. (121 aa)
	LOC109016659	Ubiquitin carboxyl-terminal hydrolase 12-like. (144 aa)
	LOC109016741	Ubiquitin carboxyl-terminal hydrolase 12-like. (95 aa)
	LOC109018454	Regulator of nonsense transcripts UPF3-like. (182 aa)
	LOC109019467	Regulator of G-protein signaling 1. (471 aa)
	LOC109019926	Ubiquitin carboxyl-terminal hydrolase 13-like; Belongs to the peptidase C19 family. (1120 aa)
	LOC109020316	LOB domain-containing protein 20. (255 aa)
	LOC109021155	Uncharacterized protein LOC109021155 isoform X1. (388 aa)

Your Current Organism:

Juglans regia

NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108980377	LOC108981134	A0A2I4DI47	A0A2I4DKT1	E3 ubiquitin ligase complex SCF subunit sconC-like; Belongs to the SKP1 family.	RING-box protein 1a.	0.959
LOC108980377	LOC108998494	A0A2I4DI47	A0A2I4FG31	E3 ubiquitin ligase complex SCF subunit sconC-like; Belongs to the SKP1 family.	Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.	0.671
LOC108980377	LOC109009026	A0A2I4DI47	A0A2I4GLX3	E3 ubiquitin ligase complex SCF subunit sconC-like; Belongs to the SKP1 family.	RING-box protein 1a-like.	0.959
LOC108981134	LOC108980377	A0A2I4DKT1	A0A2I4DI47	RING-box protein 1a.	E3 ubiquitin ligase complex SCF subunit sconC-like; Belongs to the SKP1 family.	0.959
LOC108981134	LOC108982669	A0A2I4DKT1	A0A2I4DR73	RING-box protein 1a.	SKP1-like protein 21.	0.869
LOC108981134	LOC108990536	A0A2I4DKT1	A0A2I4EKZ9	RING-box protein 1a.	SKP1-like protein 1B; Belongs to the SKP1 family.	0.959
LOC108981134	LOC108990873	A0A2I4DKT1	A0A2I4EMA4	RING-box protein 1a.	SKP1-like protein 21; Belongs to the SKP1 family.	0.869
LOC108981134	LOC108998494	A0A2I4DKT1	A0A2I4FG31	RING-box protein 1a.	Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.	0.983
LOC108981134	LOC109002041	A0A2I4DKT1	A0A2I4FU23	RING-box protein 1a.	SKP1-like protein 21 isoform X1; Belongs to the SKP1 family.	0.869
LOC108981134	LOC109006992	A0A2I4DKT1	A0A2I4GDM1	RING-box protein 1a.	SKP1-like protein 1A; Belongs to the SKP1 family.	0.869
LOC108981134	LOC109009026	A0A2I4DKT1	A0A2I4GLX3	RING-box protein 1a.	RING-box protein 1a-like.	0.900
LOC108981134	LOC109010437	A0A2I4DKT1	A0A2I4GSE7	RING-box protein 1a.	SKP1-like protein 1B; Belongs to the SKP1 family.	0.959
LOC108981134	LOC109011235	A0A2I4DKT1	A0A2I4GVG8	RING-box protein 1a.	SKP1-like protein 1B; Belongs to the SKP1 family.	0.959
LOC108981134	LOC109011265	A0A2I4DKT1	A0A2I4GVK2	RING-box protein 1a.	E3 ubiquitin ligase complex SCF subunit sconC-like; Belongs to the SKP1 family.	0.869
LOC108981134	LOC109013834	A0A2I4DKT1	A0A2I4H632	RING-box protein 1a.	SKP1-like protein 11; Belongs to the SKP1 family.	0.959
LOC108982669	LOC108981134	A0A2I4DR73	A0A2I4DKT1	SKP1-like protein 21.	RING-box protein 1a.	0.869
LOC108982669	LOC108998494	A0A2I4DR73	A0A2I4FG31	SKP1-like protein 21.	Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.	0.671
LOC108982669	LOC109009026	A0A2I4DR73	A0A2I4GLX3	SKP1-like protein 21.	RING-box protein 1a-like.	0.869
LOC108983721	LOC108988921	A0A2I4DV30	A0A2I4EEP7	Regulator of nonsense transcripts UPF3-like isoform X1.	Regulator of nonsense transcripts UPF3-like isoform X1.	0.901
LOC108983721	LOC108997084	A0A2I4DV30	A0A2I4FAR4	Regulator of nonsense transcripts UPF3-like isoform X1.	Regulator of nonsense transcripts UPF2.	0.997