115 items (Juglans regia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108988838	KRR1 small subunit processome component homolog. (189 aa)
	LOC108988136	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (191 aa)
	LOC108987091	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (191 aa)
	LOC108986870	U3 small nucleolar RNA-associated protein 14. (927 aa)
	LOC108986455	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (434 aa)
	LOC108986306	Uncharacterized protein LOC108986306 isoform X1. (245 aa)
	LOC108985172	rRNA biogenesis protein RRP5 isoform X1. (1928 aa)
	LOC108984629	Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like. (408 aa)
	LOC108984499	Ribosome biogenesis protein ENP2-like. (184 aa)
	LOC108984037	Nucleolar protein 10-like. (256 aa)
	LOC108983965	Nucleolar protein 56-like. (549 aa)
	LOC108983289	Zinc finger CCCH domain-containing protein 48-like isoform X1. (431 aa)
	LOC108983139	Probable U3 small nucleolar RNA-associated protein 7 isoform X1. (514 aa)
	LOC108982784	Something about silencing protein 10 isoform X1. (678 aa)
	LOC108982270	Probable rRNA-processing protein EBP2 homolog. (299 aa)
	LOC108982214	Protein LTV1 homolog isoform X1. (543 aa)
	LOC108981859	Protein KRI1 homolog. (639 aa)
	LOC108980393	Ribosome biogenesis protein BMS1 homolog isoform X1. (1221 aa)
	LOC108979950	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
	LOC108979446	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (100 aa)
	LOC109022337	Ribosomal RNA small subunit methyltransferase NEP1-like. (126 aa)
	LOC109022156	Small subunit processome component 20 homolog isoform X1. (268 aa)
	LOC109022159	Serine/threonine-protein kinase rio2-like. (280 aa)
	LOC109022183	Uncharacterized protein LOC109022183. (205 aa)
	LOC109022127	Small subunit processome component 20 homolog isoform X1. (2691 aa)
	LOC109022108	Uncharacterized protein LOC109022108. (197 aa)
	LOC109021825	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (200 aa)
	LOC109021655	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (605 aa)
	LOC109021481	rRNA biogenesis protein RRP5-like. (86 aa)
	LOC109021458	Peter Pan-like protein. (349 aa)
	LOC109021180	Neuroguidin. (319 aa)
	LOC109019872	rRNA biogenesis protein RRP5-like isoform X1. (439 aa)
	LOC109019699	rRNA biogenesis protein RRP5-like. (304 aa)
	LOC109019399	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (105 aa)
	LOC109018057	Transducin beta-like protein 3. (230 aa)
	LOC109017998	Uncharacterized protein LOC109017998 isoform X1. (651 aa)
	LOC109017875	Serine/threonine-protein kinase rio2-like. (246 aa)
	LOC109017506	Pescadillo homolog. (362 aa)
	LOC109017451	Pescadillo homolog. (362 aa)
	LOC109016895	Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like. (111 aa)
	LOC109016711	KRR1 small subunit processome component homolog. (121 aa)
	LOC109015979	Nucleolar protein 10-like. (156 aa)
	LOC109014487	Protein MAK16 homolog; Belongs to the MAK16 family. (301 aa)
	LOC109014448	Uncharacterized protein LOC109014448. (610 aa)
	LOC109014112	Bystin. (446 aa)
	LOC109013798	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (834 aa)
	LOC109013573	Uncharacterized protein LOC109013572. (156 aa)
	LOC109013530	Ribosome biogenesis protein NSA2 homolog. (260 aa)
	LOC109013418	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (229 aa)
	LOC109013311	U3 small nucleolar ribonucleoprotein protein IMP4-like. (135 aa)
	LOC109013300	U3 small nucleolar ribonucleoprotein protein IMP4. (293 aa)
	LOC109012596	U3 small nucleolar RNA-associated protein 6 homolog. (655 aa)
	LOC109012418	Transducin beta-like protein 3. (748 aa)
	LOC109011606	Nucleolar protein 10. (653 aa)
	LOC109011590	Ribosomal RNA small subunit methyltransferase nep-1. (286 aa)
	LOC109010760	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	LOC109009847	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (195 aa)
	LOC109009581	Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1. (414 aa)
	LOC109009453	Ribosomal RNA processing protein 1 homolog A-like. (564 aa)
	LOC109009290	Probable nucleolar protein 5-2. (579 aa)
	LOC109009291	Probable nucleolar protein 5-2. (578 aa)
	LOC109009007	Serine/threonine-protein kinase rio2 isoform X1. (474 aa)
	LOC109008956	Ribosomal RNA processing protein 1 homolog. (573 aa)
	LOC109007233	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (469 aa)
	LOC109007051	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (226 aa)
	LOC109006657	Nucleolar complex protein 4 homolog. (609 aa)
	LOC109006247	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	LOC109005693	WD repeat-containing protein 3 isoform X1. (937 aa)
	LOC109005490	Zinc finger CCCH domain-containing protein 48-like. (81 aa)
	LOC109005352	Ribosomal L1 domain-containing protein 1-like. (426 aa)
	LOC109005200	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (340 aa)
	LOC109005110	rRNA-processing protein EFG1-like isoform X1. (334 aa)
	LOC109004990	Pumilio homolog 23. (937 aa)
	LOC109004167	rRNA-processing protein FCF1 homolog isoform X1. (198 aa)
	LOC109004038	U3 small nucleolar RNA-associated protein 25 isoform X1. (740 aa)
	LOC109003896	U3 snoRNP-associated protein-like EMB2271. (512 aa)
	LOC109003537	Eukaryotic translation initiation factor 6-like. (172 aa)
	LOC109003389	KRR1 small subunit processome component homolog. (220 aa)
	LOC109002927	pre-rRNA-processing protein TSR1 homolog. (794 aa)
	LOC109002647	Zinc finger CCCH domain-containing protein 63-like isoform X1. (155 aa)
	LOC109002003	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5488 aa)
	LOC109001849	rRNA-processing protein UTP23 homolog. (283 aa)
	LOC109001457	Ribosome production factor 1. (365 aa)
	LOC109001450	DDB1- and CUL4-associated factor 13. (452 aa)
	LOC109001346	Ribosomal RNA-processing protein 7 homolog A. (234 aa)
	LOC109001111	Uncharacterized protein LOC109001111. (202 aa)
	LOC109001106	Uncharacterized protein LOC109001106. (368 aa)
	LOC109000760	RRP15-like protein. (310 aa)
	LOC109000740	RRP15-like protein isoform X1. (306 aa)
	LOC109000151	rRNA biogenesis protein RRP5-like. (247 aa)
	LOC108999761	Transducin beta-like protein 3. (160 aa)
	LOC108999689	Transducin beta-like protein 3. (345 aa)
	LOC108999262	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (379 aa)
	LOC108998836	Uncharacterized protein At3g06530 isoform X1. (2170 aa)
	LOC108998558	Zinc finger CCCH domain-containing protein 48-like. (426 aa)
	LOC108998146	U3 small nucleolar ribonucleoprotein protein IMP3-like. (185 aa)
	LOC108997566	Nucleolar protein 6. (1046 aa)
	LOC108997135	Nucleolar complex protein 2 homolog. (728 aa)
	LOC108997099	Ribosomal RNA processing protein 36 homolog isoform X1. (295 aa)
	LOC108996020	U3 small nucleolar RNA-associated protein 18 homolog. (565 aa)
	LOC108995067	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
	LOC108994695	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
	LOC108994511	Nucleolar complex protein 2 homolog. (727 aa)
	LOC108993192	Periodic tryptophan protein 2 homolog. (890 aa)
	LOC108993158	U3 small nucleolar RNA-associated protein 21 homolog. (908 aa)
	LOC108992898	Nucleolar protein 56-like. (551 aa)
	LOC108992626	WD repeat-containing protein DDB_G0290555. (455 aa)
	LOC108992647	Mediator of RNA polymerase II transcription subunit 36a-like isoform X1. (311 aa)
	LOC108991481	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (536 aa)
	LOC108991337	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (230 aa)
	LOC108989940	Mediator of RNA polymerase II transcription subunit 36a-like isoform X1. (314 aa)
	LOC108989735	Protein MAK16 homolog; Belongs to the MAK16 family. (299 aa)
	LOC108989383	Nucleolar protein 14. (947 aa)
	LOC108988899	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (732 aa)
	LOC108988344	Ribosomal L1 domain-containing protein 1-like. (428 aa)

Your Current Organism:

Juglans regia

NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108979446	LOC108980393	A0A2I4DEU3	A0A2I4DI75	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	Ribosome biogenesis protein BMS1 homolog isoform X1.	0.955
LOC108979446	LOC108982214	A0A2I4DEU3	A0A2I4DPJ5	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	Protein LTV1 homolog isoform X1.	0.950
LOC108979446	LOC108982784	A0A2I4DEU3	A0A2I4DRL1	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	Something about silencing protein 10 isoform X1.	0.952
LOC108979446	LOC108983139	A0A2I4DEU3	A0A2I4DSW3	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	Probable U3 small nucleolar RNA-associated protein 7 isoform X1.	0.951
LOC108979446	LOC108983965	A0A2I4DEU3	A0A2I4DVY4	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	Nucleolar protein 56-like.	0.917
LOC108979446	LOC108984037	A0A2I4DEU3	A0A2I4DW98	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	Nucleolar protein 10-like.	0.632
LOC108979446	LOC108984499	A0A2I4DEU3	A0A2I4DY03	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	Ribosome biogenesis protein ENP2-like.	0.632
LOC108979446	LOC108985172	A0A2I4DEU3	A0A2I4E0J1	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	rRNA biogenesis protein RRP5 isoform X1.	0.834
LOC108979446	LOC108986306	A0A2I4DEU3	A0A2I4E4V3	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	Uncharacterized protein LOC108986306 isoform X1.	0.438
LOC108979446	LOC108986870	A0A2I4DEU3	A0A2I4E725	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	U3 small nucleolar RNA-associated protein 14.	0.954
LOC108979446	LOC108988344	A0A2I4DEU3	A0A2I4ECK6	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	Ribosomal L1 domain-containing protein 1-like.	0.703
LOC108979446	LOC108988838	A0A2I4DEU3	A0A2I4EED2	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	KRR1 small subunit processome component homolog.	0.851
LOC108979446	LOC108989383	A0A2I4DEU3	A0A2I4EGH9	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	Nucleolar protein 14.	0.950
LOC108979446	LOC108989940	A0A2I4DEU3	A0A2I4EIN5	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	Mediator of RNA polymerase II transcription subunit 36a-like isoform X1.	0.926
LOC108979446	LOC108991337	A0A2I4DEU3	A0A2I4ENX2	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.951
LOC108979446	LOC108991481	A0A2I4DEU3	A0A2I4EPF4	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	0.955
LOC108979446	LOC108992647	A0A2I4DEU3	A0A2I4ETR6	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	Mediator of RNA polymerase II transcription subunit 36a-like isoform X1.	0.926
LOC108979446	LOC108992898	A0A2I4DEU3	A0A2I4EUW3	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	Nucleolar protein 56-like.	0.917
LOC108979446	LOC108993158	A0A2I4DEU3	A0A2I4EVR6	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	U3 small nucleolar RNA-associated protein 21 homolog.	0.953
LOC108979446	LOC108993192	A0A2I4DEU3	A0A2I4EVX9	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	Periodic tryptophan protein 2 homolog.	0.954