STRINGSTRING
LOC108988838 LOC108988838 LOC108988136 LOC108988136 LOC108987091 LOC108987091 LOC108986870 LOC108986870 LOC108986455 LOC108986455 LOC108986306 LOC108986306 LOC108985172 LOC108985172 LOC108984629 LOC108984629 LOC108984499 LOC108984499 LOC108984037 LOC108984037 LOC108983965 LOC108983965 LOC108983289 LOC108983289 LOC108983139 LOC108983139 LOC108982784 LOC108982784 LOC108982270 LOC108982270 LOC108982214 LOC108982214 LOC108981859 LOC108981859 LOC108980393 LOC108980393 LOC108979950 LOC108979950 LOC108979446 LOC108979446 LOC109022337 LOC109022337 LOC109022156 LOC109022156 LOC109022159 LOC109022159 LOC109022183 LOC109022183 LOC109022127 LOC109022127 LOC109022108 LOC109022108 LOC109021825 LOC109021825 LOC109021655 LOC109021655 LOC109021481 LOC109021481 LOC109021458 LOC109021458 LOC109021180 LOC109021180 LOC109019872 LOC109019872 LOC109019699 LOC109019699 LOC109019399 LOC109019399 LOC109018057 LOC109018057 LOC109017998 LOC109017998 LOC109017875 LOC109017875 LOC109017506 LOC109017506 LOC109017451 LOC109017451 LOC109016895 LOC109016895 LOC109016711 LOC109016711 LOC109015979 LOC109015979 LOC109014487 LOC109014487 LOC109014448 LOC109014448 LOC109014112 LOC109014112 LOC109013798 LOC109013798 LOC109013573 LOC109013573 LOC109013530 LOC109013530 LOC109013418 LOC109013418 LOC109013311 LOC109013311 LOC109013300 LOC109013300 LOC109012596 LOC109012596 LOC109012418 LOC109012418 LOC109011606 LOC109011606 LOC109011590 LOC109011590 LOC109010760 LOC109010760 LOC109009847 LOC109009847 LOC109009581 LOC109009581 LOC109009453 LOC109009453 LOC109009290 LOC109009290 LOC109009291 LOC109009291 LOC109009007 LOC109009007 LOC109008956 LOC109008956 LOC109007233 LOC109007233 LOC109007051 LOC109007051 LOC109006657 LOC109006657 LOC109006247 LOC109006247 LOC109005693 LOC109005693 LOC109005490 LOC109005490 LOC109005352 LOC109005352 LOC109005200 LOC109005200 LOC109005110 LOC109005110 LOC109004990 LOC109004990 LOC109004167 LOC109004167 LOC109004038 LOC109004038 LOC109003896 LOC109003896 LOC109003537 LOC109003537 LOC109003389 LOC109003389 LOC109002927 LOC109002927 LOC109002647 LOC109002647 LOC109002003 LOC109002003 LOC109001849 LOC109001849 LOC109001457 LOC109001457 LOC109001450 LOC109001450 LOC109001346 LOC109001346 LOC109001111 LOC109001111 LOC109001106 LOC109001106 LOC109000760 LOC109000760 LOC109000740 LOC109000740 LOC109000151 LOC109000151 LOC108999761 LOC108999761 LOC108999689 LOC108999689 LOC108999262 LOC108999262 LOC108998836 LOC108998836 LOC108998558 LOC108998558 LOC108998146 LOC108998146 LOC108997566 LOC108997566 LOC108997135 LOC108997135 LOC108997099 LOC108997099 LOC108996020 LOC108996020 LOC108995067 LOC108995067 LOC108994695 LOC108994695 LOC108994511 LOC108994511 LOC108993192 LOC108993192 LOC108993158 LOC108993158 LOC108992898 LOC108992898 LOC108992626 LOC108992626 LOC108992647 LOC108992647 LOC108991481 LOC108991481 LOC108991337 LOC108991337 LOC108989940 LOC108989940 LOC108989735 LOC108989735 LOC108989383 LOC108989383 LOC108988899 LOC108988899 LOC108988344 LOC108988344
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108988838KRR1 small subunit processome component homolog. (189 aa)
LOC10898813640S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (191 aa)
LOC10898709140S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (191 aa)
LOC108986870U3 small nucleolar RNA-associated protein 14. (927 aa)
LOC108986455Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (434 aa)
LOC108986306Uncharacterized protein LOC108986306 isoform X1. (245 aa)
LOC108985172rRNA biogenesis protein RRP5 isoform X1. (1928 aa)
LOC108984629Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like. (408 aa)
LOC108984499Ribosome biogenesis protein ENP2-like. (184 aa)
LOC108984037Nucleolar protein 10-like. (256 aa)
LOC108983965Nucleolar protein 56-like. (549 aa)
LOC108983289Zinc finger CCCH domain-containing protein 48-like isoform X1. (431 aa)
LOC108983139Probable U3 small nucleolar RNA-associated protein 7 isoform X1. (514 aa)
LOC108982784Something about silencing protein 10 isoform X1. (678 aa)
LOC108982270Probable rRNA-processing protein EBP2 homolog. (299 aa)
LOC108982214Protein LTV1 homolog isoform X1. (543 aa)
LOC108981859Protein KRI1 homolog. (639 aa)
LOC108980393Ribosome biogenesis protein BMS1 homolog isoform X1. (1221 aa)
LOC108979950Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
LOC10897944640S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (100 aa)
LOC109022337Ribosomal RNA small subunit methyltransferase NEP1-like. (126 aa)
LOC109022156Small subunit processome component 20 homolog isoform X1. (268 aa)
LOC109022159Serine/threonine-protein kinase rio2-like. (280 aa)
LOC109022183Uncharacterized protein LOC109022183. (205 aa)
LOC109022127Small subunit processome component 20 homolog isoform X1. (2691 aa)
LOC109022108Uncharacterized protein LOC109022108. (197 aa)
LOC10902182540S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (200 aa)
LOC109021655Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (605 aa)
LOC109021481rRNA biogenesis protein RRP5-like. (86 aa)
LOC109021458Peter Pan-like protein. (349 aa)
LOC109021180Neuroguidin. (319 aa)
LOC109019872rRNA biogenesis protein RRP5-like isoform X1. (439 aa)
LOC109019699rRNA biogenesis protein RRP5-like. (304 aa)
LOC109019399Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (105 aa)
LOC109018057Transducin beta-like protein 3. (230 aa)
LOC109017998Uncharacterized protein LOC109017998 isoform X1. (651 aa)
LOC109017875Serine/threonine-protein kinase rio2-like. (246 aa)
LOC109017506Pescadillo homolog. (362 aa)
LOC109017451Pescadillo homolog. (362 aa)
LOC109016895Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like. (111 aa)
LOC109016711KRR1 small subunit processome component homolog. (121 aa)
LOC109015979Nucleolar protein 10-like. (156 aa)
LOC109014487Protein MAK16 homolog; Belongs to the MAK16 family. (301 aa)
LOC109014448Uncharacterized protein LOC109014448. (610 aa)
LOC109014112Bystin. (446 aa)
LOC109013798Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (834 aa)
LOC109013573Uncharacterized protein LOC109013572. (156 aa)
LOC109013530Ribosome biogenesis protein NSA2 homolog. (260 aa)
LOC109013418Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (229 aa)
LOC109013311U3 small nucleolar ribonucleoprotein protein IMP4-like. (135 aa)
LOC109013300U3 small nucleolar ribonucleoprotein protein IMP4. (293 aa)
LOC109012596U3 small nucleolar RNA-associated protein 6 homolog. (655 aa)
LOC109012418Transducin beta-like protein 3. (748 aa)
LOC109011606Nucleolar protein 10. (653 aa)
LOC109011590Ribosomal RNA small subunit methyltransferase nep-1. (286 aa)
LOC109010760Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
LOC109009847Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (195 aa)
LOC109009581Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1. (414 aa)
LOC109009453Ribosomal RNA processing protein 1 homolog A-like. (564 aa)
LOC109009290Probable nucleolar protein 5-2. (579 aa)
LOC109009291Probable nucleolar protein 5-2. (578 aa)
LOC109009007Serine/threonine-protein kinase rio2 isoform X1. (474 aa)
LOC109008956Ribosomal RNA processing protein 1 homolog. (573 aa)
LOC109007233Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (469 aa)
LOC109007051Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (226 aa)
LOC109006657Nucleolar complex protein 4 homolog. (609 aa)
LOC109006247Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
LOC109005693WD repeat-containing protein 3 isoform X1. (937 aa)
LOC109005490Zinc finger CCCH domain-containing protein 48-like. (81 aa)
LOC109005352Ribosomal L1 domain-containing protein 1-like. (426 aa)
LOC109005200Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (340 aa)
LOC109005110rRNA-processing protein EFG1-like isoform X1. (334 aa)
LOC109004990Pumilio homolog 23. (937 aa)
LOC109004167rRNA-processing protein FCF1 homolog isoform X1. (198 aa)
LOC109004038U3 small nucleolar RNA-associated protein 25 isoform X1. (740 aa)
LOC109003896U3 snoRNP-associated protein-like EMB2271. (512 aa)
LOC109003537Eukaryotic translation initiation factor 6-like. (172 aa)
LOC109003389KRR1 small subunit processome component homolog. (220 aa)
LOC109002927pre-rRNA-processing protein TSR1 homolog. (794 aa)
LOC109002647Zinc finger CCCH domain-containing protein 63-like isoform X1. (155 aa)
LOC109002003Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5488 aa)
LOC109001849rRNA-processing protein UTP23 homolog. (283 aa)
LOC109001457Ribosome production factor 1. (365 aa)
LOC109001450DDB1- and CUL4-associated factor 13. (452 aa)
LOC109001346Ribosomal RNA-processing protein 7 homolog A. (234 aa)
LOC109001111Uncharacterized protein LOC109001111. (202 aa)
LOC109001106Uncharacterized protein LOC109001106. (368 aa)
LOC109000760RRP15-like protein. (310 aa)
LOC109000740RRP15-like protein isoform X1. (306 aa)
LOC109000151rRNA biogenesis protein RRP5-like. (247 aa)
LOC108999761Transducin beta-like protein 3. (160 aa)
LOC108999689Transducin beta-like protein 3. (345 aa)
LOC108999262KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (379 aa)
LOC108998836Uncharacterized protein At3g06530 isoform X1. (2170 aa)
LOC108998558Zinc finger CCCH domain-containing protein 48-like. (426 aa)
LOC108998146U3 small nucleolar ribonucleoprotein protein IMP3-like. (185 aa)
LOC108997566Nucleolar protein 6. (1046 aa)
LOC108997135Nucleolar complex protein 2 homolog. (728 aa)
LOC108997099Ribosomal RNA processing protein 36 homolog isoform X1. (295 aa)
LOC108996020U3 small nucleolar RNA-associated protein 18 homolog. (565 aa)
LOC10899506760S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
LOC10899469560S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
LOC108994511Nucleolar complex protein 2 homolog. (727 aa)
LOC108993192Periodic tryptophan protein 2 homolog. (890 aa)
LOC108993158U3 small nucleolar RNA-associated protein 21 homolog. (908 aa)
LOC108992898Nucleolar protein 56-like. (551 aa)
LOC108992626WD repeat-containing protein DDB_G0290555. (455 aa)
LOC108992647Mediator of RNA polymerase II transcription subunit 36a-like isoform X1. (311 aa)
LOC108991481U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (536 aa)
LOC108991337U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (230 aa)
LOC108989940Mediator of RNA polymerase II transcription subunit 36a-like isoform X1. (314 aa)
LOC108989735Protein MAK16 homolog; Belongs to the MAK16 family. (299 aa)
LOC108989383Nucleolar protein 14. (947 aa)
LOC108988899Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (732 aa)
LOC108988344Ribosomal L1 domain-containing protein 1-like. (428 aa)
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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