STRINGSTRING
LOC109007051 LOC109007051 LOC109007233 LOC109007233 LOC109008741 LOC109008741 LOC109008952 LOC109008952 LOC109008995 LOC109008995 LOC109009581 LOC109009581 LOC109009833 LOC109009833 LOC109009837 LOC109009837 LOC109009847 LOC109009847 LOC109010432 LOC109010432 LOC109010760 LOC109010760 LOC109010807 LOC109010807 LOC109010808 LOC109010808 LOC108979068 LOC108979068 LOC108979656 LOC108979656 LOC108979950 LOC108979950 LOC108980032 LOC108980032 LOC108980686 LOC108980686 LOC108981003 LOC108981003 LOC108981168 LOC108981168 LOC108981357 LOC108981357 LOC108981771 LOC108981771 LOC108982270 LOC108982270 LOC109021096 LOC109021096 LOC109021246 LOC109021246 LOC109015031 LOC109015031 LOC109021458 LOC109021458 LOC109021655 LOC109021655 LOC109021660 LOC109021660 LOC109021767 LOC109021767 LOC109021792 LOC109021792 LOC109015389 LOC109015389 LOC109015801 LOC109015801 LOC109016855 LOC109016855 LOC109016895 LOC109016895 LOC109016908 LOC109016908 LOC109021970 LOC109021970 LOC109017270 LOC109017270 LOC109017451 LOC109017451 LOC109017506 LOC109017506 LOC109017943 LOC109017943 LOC109017998 LOC109017998 LOC109018230 LOC109018230 LOC109018396 LOC109018396 LOC109018453 LOC109018453 LOC109018579 LOC109018579 LOC109019150 LOC109019150 LOC109019287 LOC109019287 LOC109019399 LOC109019399 LOC109019864 LOC109019864 LOC109019974 LOC109019974 LOC108982817 LOC108982817 LOC108983821 LOC108983821 LOC108984551 LOC108984551 LOC108999265 LOC108999265 LOC108999712 LOC108999712 LOC109000180 LOC109000180 LOC109000592 LOC109000592 LOC109000740 LOC109000740 LOC109000760 LOC109000760 LOC109001111 LOC109001111 LOC109001457 LOC109001457 LOC109001513 LOC109001513 LOC108984598 LOC108984598 LOC108984629 LOC108984629 LOC108984791 LOC108984791 LOC108985661 LOC108985661 LOC108986141 LOC108986141 LOC108986455 LOC108986455 LOC108987080 LOC108987080 LOC108987353 LOC108987353 LOC108987653 LOC108987653 LOC108987972 LOC108987972 LOC108988299 LOC108988299 LOC108988344 LOC108988344 LOC108988389 LOC108988389 LOC108988566 LOC108988566 LOC108988899 LOC108988899 LOC108989628 LOC108989628 LOC108989735 LOC108989735 LOC108990277 LOC108990277 LOC108990724 LOC108990724 LOC108990790 LOC108990790 LOC108990990 LOC108990990 LOC108991213 LOC108991213 LOC108991444 LOC108991444 LOC108991888 LOC108991888 LOC108991896 LOC108991896 LOC108992626 LOC108992626 LOC108992758 LOC108992758 LOC108993049 LOC108993049 LOC108994511 LOC108994511 LOC108994543 LOC108994543 LOC108994695 LOC108994695 LOC108995067 LOC108995067 LOC108995920 LOC108995920 LOC108996484 LOC108996484 LOC108997135 LOC108997135 LOC109011064 LOC109011064 LOC109010804 LOC109010804 LOC109002068 LOC109002068 LOC108998713 LOC108998713 LOC109002003 LOC109002003 LOC109020229 LOC109020229 LOC109020362 LOC109020362 LOC109020863 LOC109020863 LOC109003019 LOC109003019 LOC109003029 LOC109003029 LOC109003313 LOC109003313 LOC109003312 LOC109003312 LOC109003317 LOC109003317 LOC109003314 LOC109003314 LOC109003537 LOC109003537 LOC109004025 LOC109004025 LOC109004257 LOC109004257 LOC109004304 LOC109004304 LOC109004305 LOC109004305 LOC109004759 LOC109004759 LOC109004760 LOC109004760 LOC109004837 LOC109004837 LOC109005200 LOC109005200 LOC109005352 LOC109005352 LOC109011499 LOC109011499 LOC109013418 LOC109013418 LOC109013429 LOC109013429 LOC109013530 LOC109013530 LOC109013798 LOC109013798 LOC109014123 LOC109014123 LOC109014122 LOC109014122 LOC109014351 LOC109014351 LOC109014487 LOC109014487 LOC109005358 LOC109005358 LOC109005687 LOC109005687 LOC109005829 LOC109005829 LOC109006062 LOC109006062 LOC109006184 LOC109006184 LOC109006247 LOC109006247 LOC109006384 LOC109006384 LOC109006530 LOC109006530 LOC109006690 LOC109006690 LOC109006883 LOC109006883 LOC109006927 LOC109006927
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC109007051Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (226 aa)
LOC109007233Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (469 aa)
LOC109008741Zinc finger HIT domain-containing protein 2 isoform X1. (409 aa)
LOC109008952Uncharacterized protein LOC109008952. (160 aa)
LOC10900899560S acidic ribosomal protein P0-like. (181 aa)
LOC109009581Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1. (414 aa)
LOC10900983360S acidic ribosomal protein P0-like. (220 aa)
LOC10900983760S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (321 aa)
LOC109009847Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (195 aa)
LOC109010432Uncharacterized protein LOC109010432. (161 aa)
LOC109010760Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
LOC10901080760S ribosomal protein L7-4-like. (164 aa)
LOC10901080860S ribosomal protein L7-4-like. (170 aa)
LOC108979068Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (157 aa)
LOC10897965660S ribosomal protein L7-2-like. (281 aa)
LOC108979950Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
LOC10898003260S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (321 aa)
LOC10898068660S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (309 aa)
LOC108981003Ribosomal RNA-processing protein 14-C-like. (342 aa)
LOC108981168DEAD-box ATP-dependent RNA helicase 39-like. (603 aa)
LOC10898135760S ribosomal protein L14-2-like. (134 aa)
LOC108981771Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (674 aa)
LOC108982270Probable rRNA-processing protein EBP2 homolog. (299 aa)
LOC10902109660S ribosomal protein L7-2-like. (230 aa)
LOC10902124660S ribosomal protein L7-2-like. (197 aa)
LOC109015031Uncharacterized RNA-binding protein C1827.05c-like. (96 aa)
LOC109021458Peter Pan-like protein. (349 aa)
LOC109021655Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (605 aa)
LOC109021660Ribosomal RNA-processing protein 14. (351 aa)
LOC10902176760S ribosomal protein L7-2. (148 aa)
LOC109021792Probable ribosome biogenesis protein RLP24. (167 aa)
LOC10901538960S ribosomal protein L7-2-like. (123 aa)
LOC109015801DEAD-box ATP-dependent RNA helicase 39-like. (121 aa)
LOC109016855Uncharacterized protein At2g40430-like. (98 aa)
LOC109016895Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like. (111 aa)
LOC109016908Uncharacterized protein LOC109016908. (119 aa)
LOC10902197060S ribosomal protein L23a-like; Belongs to the universal ribosomal protein uL23 family. (154 aa)
LOC10901727060S ribosomal protein L10-like. (204 aa)
LOC109017451Pescadillo homolog. (362 aa)
LOC109017506Pescadillo homolog. (362 aa)
LOC10901794360S ribosomal protein L7-4-like. (139 aa)
LOC109017998Uncharacterized protein LOC109017998 isoform X1. (651 aa)
LOC109018230DEAD-box ATP-dependent RNA helicase 39-like. (168 aa)
LOC109018396Uncharacterized protein LOC109018396. (247 aa)
LOC10901845360S ribosomal protein L7-2-like. (105 aa)
LOC10901857960S ribosomal protein L7-2-like. (205 aa)
LOC10901915060S ribosomal protein L23a-2; Belongs to the universal ribosomal protein uL23 family. (154 aa)
LOC10901928760S ribosomal protein L7-2-like. (140 aa)
LOC109019399Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (105 aa)
LOC10901986460S ribosomal protein L35a-1-like. (112 aa)
LOC10901997460S ribosomal protein L7-2-like. (246 aa)
LOC108982817P21-activated protein kinase-interacting protein 1-like. (187 aa)
LOC108983821Uncharacterized protein LOC108983821 isoform X1. (2605 aa)
LOC10898455160S ribosomal protein L7a-1. (259 aa)
LOC108999265Polynucleotide 5'-hydroxyl-kinase NOL9. (378 aa)
LOC108999712Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (813 aa)
LOC10900018060S ribosomal protein L7-2-like. (132 aa)
LOC10900059260S ribosomal protein L7-4-like. (175 aa)
LOC109000740RRP15-like protein isoform X1. (306 aa)
LOC109000760RRP15-like protein. (310 aa)
LOC109001111Uncharacterized protein LOC109001111. (202 aa)
LOC109001457Ribosome production factor 1. (365 aa)
LOC10900151360S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (233 aa)
LOC10898459860S ribosomal protein L7-1. (245 aa)
LOC108984629Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like. (408 aa)
LOC108984791Ribosome production factor 2 homolog. (315 aa)
LOC108985661Nucleolar protein 16-like. (191 aa)
LOC108986141DEAD-box ATP-dependent RNA helicase 27-like isoform X1. (147 aa)
LOC108986455Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (434 aa)
LOC10898708060S ribosomal protein L7a-1-like. (259 aa)
LOC10898735360S ribosomal protein L7-1-like isoform X1. (258 aa)
LOC10898765360S ribosomal protein L7-1-like isoform X1. (258 aa)
LOC10898797260S ribosomal protein L6-like. (233 aa)
LOC108988299Probable ribosome biogenesis protein RLP24. (167 aa)
LOC108988344Ribosomal L1 domain-containing protein 1-like. (428 aa)
LOC108988389Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (380 aa)
LOC10898856660S ribosomal protein L26-1-like. (146 aa)
LOC108988899Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (732 aa)
LOC108989628Nucleolar GTP-binding protein 1 isoform X1. (461 aa)
LOC108989735Protein MAK16 homolog; Belongs to the MAK16 family. (299 aa)
LOC108990277P21-activated protein kinase-interacting protein 1-like. (340 aa)
LOC108990724Zinc finger HIT domain-containing protein 3-like isoform X1. (161 aa)
LOC108990790DEAD-box ATP-dependent RNA helicase 27-like; Belongs to the DEAD box helicase family. (436 aa)
LOC10899099060S ribosomal protein L23a-like; Belongs to the universal ribosomal protein uL23 family. (154 aa)
LOC10899121360S ribosomal protein L14-1. (134 aa)
LOC108991444Protein SLOW GREEN 1, chloroplastic-like. (349 aa)
LOC10899188860S ribosomal protein L35a-1. (112 aa)
LOC10899189660S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (321 aa)
LOC108992626WD repeat-containing protein DDB_G0290555. (455 aa)
LOC108992758Uncharacterized protein LOC108992758 isoform X1. (419 aa)
LOC108993049Ribosome biogenesis protein BRX1-like. (314 aa)
LOC108994511Nucleolar complex protein 2 homolog. (727 aa)
LOC108994543Uncharacterized protein LOC108994543 isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (545 aa)
LOC10899469560S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
LOC10899506760S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
LOC108995920Probable 60S ribosomal protein L14. (97 aa)
LOC10899648460S ribosomal protein L35-like. (123 aa)
LOC108997135Nucleolar complex protein 2 homolog. (728 aa)
LOC109011064P21-activated protein kinase-interacting protein 1-like. (338 aa)
LOC10901080460S ribosomal protein L7-4-like. (212 aa)
LOC109002068Uncharacterized protein LOC109002068 isoform X1. (652 aa)
LOC108998713Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (674 aa)
LOC109002003Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5488 aa)
LOC109020229DEAD-box ATP-dependent RNA helicase 39-like. (215 aa)
LOC109020362Zinc finger HIT domain-containing protein 3-like isoform X1. (161 aa)
LOC10902086360S ribosomal protein L10. (220 aa)
LOC10900301960S ribosomal protein L35. (123 aa)
LOC10900302960S ribosomal protein L23a-2-like; Belongs to the universal ribosomal protein uL23 family. (154 aa)
LOC109003313DEAD-box ATP-dependent RNA helicase 27-like. (92 aa)
LOC109003312DEAD-box ATP-dependent RNA helicase 27-like. (229 aa)
LOC109003317DEAD-box ATP-dependent RNA helicase 27-like; Belongs to the DEAD box helicase family. (437 aa)
LOC109003314RNA helicase. (523 aa)
LOC109003537Eukaryotic translation initiation factor 6-like. (172 aa)
LOC109004025MKI67 FHA domain-interacting nucleolar phosphoprotein-like. (125 aa)
LOC10900425750S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (125 aa)
LOC10900430460S ribosomal protein L6-1-like. (215 aa)
LOC10900430560S ribosomal protein L6-1-like. (133 aa)
LOC109004759Uncharacterized protein LOC109004759 isoform X1. (193 aa)
LOC109004760Uncharacterized protein At2g40430 isoform X1. (364 aa)
LOC109004837Box C/D snoRNA protein 1. (413 aa)
LOC109005200Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (340 aa)
LOC109005352Ribosomal L1 domain-containing protein 1-like. (426 aa)
LOC10901149960S ribosomal protein L7-2-like. (140 aa)
LOC109013418Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (229 aa)
LOC109013429Ribosome biogenesis protein BRX1-like. (313 aa)
LOC109013530Ribosome biogenesis protein NSA2 homolog. (260 aa)
LOC109013798Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (834 aa)
LOC109014123Uncharacterized protein LOC109014123. (222 aa)
LOC109014122Uncharacterized protein LOC109014122 isoform X1. (421 aa)
LOC10901435160S ribosomal protein L5. (300 aa)
LOC109014487Protein MAK16 homolog; Belongs to the MAK16 family. (301 aa)
LOC109005358Protein SLOW GREEN 1, chloroplastic. (375 aa)
LOC10900568760S ribosomal protein L26-1. (146 aa)
LOC10900582960S ribosomal protein L5-like. (299 aa)
LOC109006062Zinc finger HIT domain-containing protein 3-like isoform X1. (175 aa)
LOC10900618460S ribosomal protein L7-2-like. (246 aa)
LOC109006247Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
LOC10900638460S ribosomal protein L35-like. (123 aa)
LOC109006530Uncharacterized protein LOC109006530 isoform X1. (199 aa)
LOC10900669060S ribosomal protein L10-like. (224 aa)
LOC109006883Notchless protein homolog. (477 aa)
LOC109006927Notchless protein homolog isoform X1. (150 aa)
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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