55 items (Juglans regia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109009976	Polypyrimidine tract-binding protein homolog 3-like. (306 aa)
	LOC109010889	Putative F-box protein At1g65770. (318 aa)
	LOC109011401	Polypyrimidine tract-binding protein homolog 3-like isoform X1. (443 aa)
	LOC109011452	Regulator of nonsense transcripts 1 homolog isoform X1. (1286 aa)
	LOC109011455	Regulator of nonsense transcripts 1 homolog. (1286 aa)
	LOC109013900	UTP:RNA uridylyltransferase 1-like. (765 aa)
	LOC109000192	Enhancer of mRNA-decapping protein 4-like. (971 aa)
	LOC108999146	Uncharacterized protein LOC108999146 isoform X1. (1656 aa)
	LOC108994898	Enhancer of mRNA-decapping protein 4-like. (1412 aa)
	LOC108995553	Uncharacterized protein LOC108995553 isoform X1. (1837 aa)
	LOC108996548	Enhancer of mRNA-decapping protein 4-like. (409 aa)
	LOC108997047	mRNA-decapping enzyme subunit 2-like. (323 aa)
	LOC108998950	mRNA-decapping enzyme-like protein. (371 aa)
	LOC108999147	Uncharacterized protein LOC108999147. (1644 aa)
	LOC108979482	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (909 aa)
	LOC108979820	Polypyrimidine tract-binding protein homolog 3-like. (213 aa)
	LOC108981830	UTP:RNA uridylyltransferase 1-like. (780 aa)
	LOC108982724	Polypyrimidine tract-binding protein homolog 2-like isoform X1. (446 aa)
	LOC108983354	Protein HESO1-like isoform X1. (426 aa)
	LOC108983870	RNA demethylase ALKBH5-like. (542 aa)
	LOC108984238	Polypyrimidine tract-binding protein homolog 3. (443 aa)
	LOC108985067	Polypyrimidine tract-binding protein homolog 2-like. (446 aa)
	LOC108985948	Polypyrimidine tract-binding protein homolog 1 isoform X1. (466 aa)
	LOC108987285	Uncharacterized protein LOC108987285. (154 aa)
	LOC108988324	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1133 aa)
	LOC108991180	Uncharacterized protein LOC108991180. (1652 aa)
	LOC108990461	Polypyrimidine tract-binding protein homolog 1-like isoform X1. (473 aa)
	LOC108994736	Uncharacterized protein LOC108994736. (117 aa)
	LOC108994257	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (992 aa)
	LOC108992018	Uncharacterized protein LOC108992018. (497 aa)
	LOC108991909	Protein HESO1-like. (426 aa)
	LOC108991847	Zinc finger CCCH domain-containing protein 29-like. (686 aa)
	LOC108991679	Uncharacterized protein LOC108991679 isoform X1. (1832 aa)
	LOC108991179	Uncharacterized protein LOC108991179 isoform X1. (1636 aa)
	LOC108989695	La-related protein 1A isoform X1. (912 aa)
	LOC109007015	Uncharacterized protein LOC109007015 isoform X1. (447 aa)
	LOC109004961	Transmembrane protein 87A-like. (153 aa)
	LOC109004956	Uncharacterized protein LOC109004956 isoform X1. (259 aa)
	LOC109004843	mRNA-decapping enzyme-like protein. (370 aa)
	LOC109003636	Enhancer of mRNA-decapping protein 4-like isoform X1. (1346 aa)
	LOC109002463	Peptidyl-prolyl cis-trans isomerase CYP65. (595 aa)
	LOC109002242	Zinc finger CCCH domain-containing protein 66-like. (705 aa)
	LOC109018767	Protein SPIRRIG. (3613 aa)
	LOC109018407	Protein MARD1-like. (284 aa)
	LOC109016399	Polypyrimidine tract-binding protein homolog 2-like. (93 aa)
	LOC109015648	Polypyrimidine tract-binding protein homolog 3-like. (385 aa)
	LOC109015076	La-related protein 1A-like. (155 aa)
	LOC109002140	mRNA-decapping enzyme-like protein. (370 aa)
	LOC109001965	Transmembrane protein 87A. (515 aa)
	LOC109001966	Uncharacterized protein LOC109001966. (261 aa)
	LOC109000236	mRNA-decapping enzyme subunit 2-like. (199 aa)
	LOC109007162	Zinc finger CCCH domain-containing protein 29-like isoform X1. (684 aa)
	LOC109008975	mRNA-decapping enzyme subunit 2-like. (328 aa)
	LOC109009716	Putative F-box protein At1g65770. (376 aa)
	LOC109009978	Polypyrimidine tract-binding protein homolog 3-like. (648 aa)

Your Current Organism:

Juglans regia

NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108979482	LOC108988324	A0A2I4DEZ8	A0A2I4ECH5	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	0.450
LOC108979482	LOC108994257	A0A2I4DEZ8	A0A2I4EZW0	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.	0.900
LOC108979482	LOC108997047	A0A2I4DEZ8	A0A2I4FAK2	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.	mRNA-decapping enzyme subunit 2-like.	0.400
LOC108979482	LOC108998950	A0A2I4DEZ8	A0A2I4FHY4	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.	mRNA-decapping enzyme-like protein.	0.554
LOC108979482	LOC109000236	A0A2I4DEZ8	A0A2I4FLV8	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.	mRNA-decapping enzyme subunit 2-like.	0.400
LOC108979482	LOC109008975	A0A2I4DEZ8	A0A2I4GLR2	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.	mRNA-decapping enzyme subunit 2-like.	0.400
LOC108979482	LOC109011452	A0A2I4DEZ8	A0A2I4GWD1	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.	Regulator of nonsense transcripts 1 homolog isoform X1.	0.502
LOC108979482	LOC109011455	A0A2I4DEZ8	A0A2I4GWE8	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.	Regulator of nonsense transcripts 1 homolog.	0.502
LOC108981830	LOC108988324	A0A2I4DNA1	A0A2I4ECH5	UTP:RNA uridylyltransferase 1-like.	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	0.586
LOC108983354	LOC108988324	A0A2I4DTM6	A0A2I4ECH5	Protein HESO1-like isoform X1.	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	0.605
LOC108987285	LOC109018407	A0A2I4E8J4	A0A2I4HIW2	Uncharacterized protein LOC108987285.	Protein MARD1-like.	0.441
LOC108988324	LOC108979482	A0A2I4ECH5	A0A2I4DEZ8	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.	0.450
LOC108988324	LOC108981830	A0A2I4ECH5	A0A2I4DNA1	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	UTP:RNA uridylyltransferase 1-like.	0.586
LOC108988324	LOC108983354	A0A2I4ECH5	A0A2I4DTM6	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	Protein HESO1-like isoform X1.	0.605
LOC108988324	LOC108991909	A0A2I4ECH5	A0A2I4ER38	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	Protein HESO1-like.	0.605
LOC108988324	LOC108994257	A0A2I4ECH5	A0A2I4EZW0	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.	0.450
LOC108988324	LOC108997047	A0A2I4ECH5	A0A2I4FAK2	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	mRNA-decapping enzyme subunit 2-like.	0.754
LOC108988324	LOC108998950	A0A2I4ECH5	A0A2I4FHY4	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	mRNA-decapping enzyme-like protein.	0.690
LOC108988324	LOC109000236	A0A2I4ECH5	A0A2I4FLV8	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	mRNA-decapping enzyme subunit 2-like.	0.754
LOC108988324	LOC109002140	A0A2I4ECH5	A0A2I4FUI4	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	mRNA-decapping enzyme-like protein.	0.686