23 items (Juglans regia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109008788	Histone acetyltransferase GCN5. (556 aa)
	LOC109021519	DDT domain-containing protein PTM-like. (364 aa)
	LOC109019589	DDT domain-containing protein PTM-like. (1738 aa)
	LOC109019079	PHD finger protein EHD3-like isoform X1. (621 aa)
	LOC109019080	PHD finger protein EHD3-like. (346 aa)
	LOC109018375	Transcription initiation factor TFIID subunit 8-like. (380 aa)
	LOC109016419	Transcription initiation factor TFIID subunit 8-like. (285 aa)
	LOC109014663	DDT domain-containing protein DDR4-like. (161 aa)
	LOC109012763	DDT domain-containing protein DDB_G0282237-like isoform X1. (735 aa)
	LOC109010818	Anaphase-promoting complex subunit 13. (63 aa)
	LOC109001768	DDT domain-containing protein DDR4 isoform X1. (547 aa)
	LOC109000673	DDT domain-containing protein PTM isoform X1. (1717 aa)
	LOC108999218	DDT domain-containing protein DDR4-like isoform X1. (724 aa)
	LOC108996716	homeobox-DDT domain protein RLT2-like isoform X1. (1770 aa)
	LOC108994637	DDT domain-containing protein PTM. (1736 aa)
	LOC108990909	Transcription initiation factor TFIID subunit 8. (368 aa)
	LOC108990653	Uncharacterized protein LOC108990653. (399 aa)
	LOC108990164	DDT domain-containing protein DDR4-like. (722 aa)
	LOC108985420	Transcription initiation factor TFIID subunit 8-like. (289 aa)
	LOC108984176	homeobox-DDT domain protein RLT1 isoform X1. (1767 aa)
	LOC108983738	DNA polymerase epsilon subunit 3. (185 aa)
	LOC108982021	DDT domain-containing protein DDB_G0282237 isoform X1. (718 aa)
	LOC108979695	Uncharacterized protein LOC108979695. (609 aa)

Your Current Organism:

Juglans regia

NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108979695	LOC108982021	A0A2I4DFQ3	A0A2I4DNV0	Uncharacterized protein LOC108979695.	DDT domain-containing protein DDB_G0282237 isoform X1.	0.551
LOC108979695	LOC108983738	A0A2I4DFQ3	A0A2I4DV53	Uncharacterized protein LOC108979695.	DNA polymerase epsilon subunit 3.	0.428
LOC108979695	LOC109012763	A0A2I4DFQ3	A0A2I4H1S4	Uncharacterized protein LOC108979695.	DDT domain-containing protein DDB_G0282237-like isoform X1.	0.551
LOC108979695	LOC109019079	A0A2I4DFQ3	A0A2I4HL73	Uncharacterized protein LOC108979695.	PHD finger protein EHD3-like isoform X1.	0.551
LOC108979695	LOC109019080	A0A2I4DFQ3	A0A2I4HL09	Uncharacterized protein LOC108979695.	PHD finger protein EHD3-like.	0.551
LOC108982021	LOC108979695	A0A2I4DNV0	A0A2I4DFQ3	DDT domain-containing protein DDB_G0282237 isoform X1.	Uncharacterized protein LOC108979695.	0.551
LOC108982021	LOC108983738	A0A2I4DNV0	A0A2I4DV53	DDT domain-containing protein DDB_G0282237 isoform X1.	DNA polymerase epsilon subunit 3.	0.890
LOC108982021	LOC108990653	A0A2I4DNV0	A0A2I4ELE9	DDT domain-containing protein DDB_G0282237 isoform X1.	Uncharacterized protein LOC108990653.	0.551
LOC108982021	LOC109008788	A0A2I4DNV0	A0A2I4GKZ2	DDT domain-containing protein DDB_G0282237 isoform X1.	Histone acetyltransferase GCN5.	0.551
LOC108983738	LOC108979695	A0A2I4DV53	A0A2I4DFQ3	DNA polymerase epsilon subunit 3.	Uncharacterized protein LOC108979695.	0.428
LOC108983738	LOC108982021	A0A2I4DV53	A0A2I4DNV0	DNA polymerase epsilon subunit 3.	DDT domain-containing protein DDB_G0282237 isoform X1.	0.890
LOC108983738	LOC108990653	A0A2I4DV53	A0A2I4ELE9	DNA polymerase epsilon subunit 3.	Uncharacterized protein LOC108990653.	0.428
LOC108983738	LOC109008788	A0A2I4DV53	A0A2I4GKZ2	DNA polymerase epsilon subunit 3.	Histone acetyltransferase GCN5.	0.428
LOC108983738	LOC109012763	A0A2I4DV53	A0A2I4H1S4	DNA polymerase epsilon subunit 3.	DDT domain-containing protein DDB_G0282237-like isoform X1.	0.890
LOC108983738	LOC109019079	A0A2I4DV53	A0A2I4HL73	DNA polymerase epsilon subunit 3.	PHD finger protein EHD3-like isoform X1.	0.890
LOC108983738	LOC109019080	A0A2I4DV53	A0A2I4HL09	DNA polymerase epsilon subunit 3.	PHD finger protein EHD3-like.	0.890
LOC108985420	LOC108990909	A0A2I4E1H3	A0A2I4EME6	Transcription initiation factor TFIID subunit 8-like.	Transcription initiation factor TFIID subunit 8.	0.900
LOC108985420	LOC109018375	A0A2I4E1H3	A0A2I4HJ35	Transcription initiation factor TFIID subunit 8-like.	Transcription initiation factor TFIID subunit 8-like.	0.900
LOC108990164	LOC109001768	A0A2I4EJK9	A0A2I4FST0	DDT domain-containing protein DDR4-like.	DDT domain-containing protein DDR4 isoform X1.	0.410
LOC108990653	LOC108982021	A0A2I4ELE9	A0A2I4DNV0	Uncharacterized protein LOC108990653.	DDT domain-containing protein DDB_G0282237 isoform X1.	0.551