26 items (Juglans regia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108979413	T-complex protein 1 subunit beta-like. (370 aa)
	LOC108983584	T-complex protein 1 subunit theta. (544 aa)
	LOC108984519	T-complex protein 1 subunit beta. (527 aa)
	LOC108987069	T-complex protein 1 subunit zeta 1 isoform X1. (535 aa)
	LOC108988025	T-complex protein 1 subunit zeta 1-like. (535 aa)
	LOC108990178	Prefoldin subunit 6-like. (130 aa)
	LOC108990809	T-complex protein 1 subunit epsilon. (535 aa)
	LOC108993147	Prefoldin subunit 1. (129 aa)
	LOC108994725	Probable prefoldin subunit 3 isoform X1. (214 aa)
	LOC108995225	Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family. (126 aa)
	LOC108997239	Probable prefoldin subunit 5. (152 aa)
	LOC108998307	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (96 aa)
	LOC109003296	Guanine nucleotide-binding protein subunit beta-2-like. (377 aa)
	LOC109003549	T-complex protein 1 subunit gamma. (557 aa)
	LOC109003684	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (562 aa)
	LOC109004276	T-complex protein 1 subunit beta-like. (377 aa)
	LOC109005843	Probable prefoldin subunit 2. (148 aa)
	LOC109007287	Probable prefoldin subunit 2. (148 aa)
	LOC109010567	T-complex protein 1 subunit theta-like. (327 aa)
	LOC109010771	Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family. (192 aa)
	LOC109011193	Guanine nucleotide-binding protein subunit beta-2. (377 aa)
	LOC109015935	T-complex protein 1 subunit theta-like. (194 aa)
	LOC109016030	T-complex protein 1 subunit alpha. (546 aa)
	LOC109016773	T-complex protein 1 subunit delta. (534 aa)
	LOC109021380	Prefoldin subunit 6-like. (130 aa)
	LOC109021904	Probable prefoldin subunit 4. (100 aa)

Your Current Organism:

Juglans regia

NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108979413	LOC108983584	A0A2I4DER4	A0A2I4DUK0	T-complex protein 1 subunit beta-like.	T-complex protein 1 subunit theta.	0.981
LOC108979413	LOC108987069	A0A2I4DER4	A0A2I4E7U5	T-complex protein 1 subunit beta-like.	T-complex protein 1 subunit zeta 1 isoform X1.	0.991
LOC108979413	LOC108988025	A0A2I4DER4	A0A2I4EB90	T-complex protein 1 subunit beta-like.	T-complex protein 1 subunit zeta 1-like.	0.991
LOC108979413	LOC108990178	A0A2I4DER4	A0A2I4EJN6	T-complex protein 1 subunit beta-like.	Prefoldin subunit 6-like.	0.734
LOC108979413	LOC108990809	A0A2I4DER4	A0A2I4EM25	T-complex protein 1 subunit beta-like.	T-complex protein 1 subunit epsilon.	0.997
LOC108979413	LOC108993147	A0A2I4DER4	A0A2I4EVP4	T-complex protein 1 subunit beta-like.	Prefoldin subunit 1.	0.829
LOC108979413	LOC108994725	A0A2I4DER4	A0A2I4F1T3	T-complex protein 1 subunit beta-like.	Probable prefoldin subunit 3 isoform X1.	0.767
LOC108979413	LOC108995225	A0A2I4DER4	A0A2I4F3Q6	T-complex protein 1 subunit beta-like.	Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.	0.720
LOC108979413	LOC108997239	A0A2I4DER4	A0A2I4FBE6	T-complex protein 1 subunit beta-like.	Probable prefoldin subunit 5.	0.858
LOC108979413	LOC108998307	A0A2I4DER4	A0A2I4FFF0	T-complex protein 1 subunit beta-like.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.991
LOC108979413	LOC109003296	A0A2I4DER4	A0A2I4FZ53	T-complex protein 1 subunit beta-like.	Guanine nucleotide-binding protein subunit beta-2-like.	0.699
LOC108979413	LOC109003549	A0A2I4DER4	A0A2I4G046	T-complex protein 1 subunit beta-like.	T-complex protein 1 subunit gamma.	0.996
LOC108979413	LOC109003684	A0A2I4DER4	A0A2I4G0P9	T-complex protein 1 subunit beta-like.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.992
LOC108979413	LOC109005843	A0A2I4DER4	A0A2I4G970	T-complex protein 1 subunit beta-like.	Probable prefoldin subunit 2.	0.789
LOC108979413	LOC109007287	A0A2I4DER4	A0A2I4GEX2	T-complex protein 1 subunit beta-like.	Probable prefoldin subunit 2.	0.789
LOC108979413	LOC109010567	A0A2I4DER4	A0A2I4GSV4	T-complex protein 1 subunit beta-like.	T-complex protein 1 subunit theta-like.	0.981
LOC108979413	LOC109010771	A0A2I4DER4	A0A2I4GTL0	T-complex protein 1 subunit beta-like.	Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.	0.767
LOC108979413	LOC109011193	A0A2I4DER4	A0A2I4GVB3	T-complex protein 1 subunit beta-like.	Guanine nucleotide-binding protein subunit beta-2.	0.699
LOC108979413	LOC109015935	A0A2I4DER4	A0A2I4HCQ0	T-complex protein 1 subunit beta-like.	T-complex protein 1 subunit theta-like.	0.981
LOC108979413	LOC109016030	A0A2I4DER4	A0A2I4HD87	T-complex protein 1 subunit beta-like.	T-complex protein 1 subunit alpha.	0.997