5 items (Juglans regia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108990826	3-phosphoinositide-dependent protein kinase 1-like. (489 aa)
	LOC108992162	3-phosphoinositide-dependent protein kinase 1-like. (110 aa)
	LOC109003296	Guanine nucleotide-binding protein subunit beta-2-like. (377 aa)
	LOC109011193	Guanine nucleotide-binding protein subunit beta-2. (377 aa)
	LOC109015605	3-phosphoinositide-dependent protein kinase 1. (489 aa)

Your Current Organism:

Juglans regia

NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108990826	LOC109003296	A0A2I4EM46	A0A2I4FZ53	3-phosphoinositide-dependent protein kinase 1-like.	Guanine nucleotide-binding protein subunit beta-2-like.	0.439
LOC108990826	LOC109011193	A0A2I4EM46	A0A2I4GVB3	3-phosphoinositide-dependent protein kinase 1-like.	Guanine nucleotide-binding protein subunit beta-2.	0.439
LOC108992162	LOC109003296	A0A2I4ERZ3	A0A2I4FZ53	3-phosphoinositide-dependent protein kinase 1-like.	Guanine nucleotide-binding protein subunit beta-2-like.	0.439
LOC108992162	LOC109011193	A0A2I4ERZ3	A0A2I4GVB3	3-phosphoinositide-dependent protein kinase 1-like.	Guanine nucleotide-binding protein subunit beta-2.	0.439
LOC109003296	LOC108990826	A0A2I4FZ53	A0A2I4EM46	Guanine nucleotide-binding protein subunit beta-2-like.	3-phosphoinositide-dependent protein kinase 1-like.	0.439
LOC109003296	LOC108992162	A0A2I4FZ53	A0A2I4ERZ3	Guanine nucleotide-binding protein subunit beta-2-like.	3-phosphoinositide-dependent protein kinase 1-like.	0.439
LOC109003296	LOC109011193	A0A2I4FZ53	A0A2I4GVB3	Guanine nucleotide-binding protein subunit beta-2-like.	Guanine nucleotide-binding protein subunit beta-2.	0.543
LOC109003296	LOC109015605	A0A2I4FZ53	A0A2I4HBU3	Guanine nucleotide-binding protein subunit beta-2-like.	3-phosphoinositide-dependent protein kinase 1.	0.439
LOC109011193	LOC108990826	A0A2I4GVB3	A0A2I4EM46	Guanine nucleotide-binding protein subunit beta-2.	3-phosphoinositide-dependent protein kinase 1-like.	0.439
LOC109011193	LOC108992162	A0A2I4GVB3	A0A2I4ERZ3	Guanine nucleotide-binding protein subunit beta-2.	3-phosphoinositide-dependent protein kinase 1-like.	0.439
LOC109011193	LOC109003296	A0A2I4GVB3	A0A2I4FZ53	Guanine nucleotide-binding protein subunit beta-2.	Guanine nucleotide-binding protein subunit beta-2-like.	0.543
LOC109011193	LOC109015605	A0A2I4GVB3	A0A2I4HBU3	Guanine nucleotide-binding protein subunit beta-2.	3-phosphoinositide-dependent protein kinase 1.	0.439
LOC109015605	LOC109003296	A0A2I4HBU3	A0A2I4FZ53	3-phosphoinositide-dependent protein kinase 1.	Guanine nucleotide-binding protein subunit beta-2-like.	0.439
LOC109015605	LOC109011193	A0A2I4HBU3	A0A2I4GVB3	3-phosphoinositide-dependent protein kinase 1.	Guanine nucleotide-binding protein subunit beta-2.	0.439