(6 nodes) Carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein, and ABC-type maltose transporter activity network (Actinoplanes missouriensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AMIS_16960	Putative ABC transporter substrate-binding protein. (478 aa)
	AMIS_16970	Putative ABC transporter permease protein. (295 aa)
	AMIS_16980	Putative ABC transporter permease protein. (296 aa)
	AMIS_23480	Putative ABC transporter permease protein. (267 aa)
	AMIS_23490	Putative ABC transporter permease protein. (292 aa)
	AMIS_23500	Putative ABC transporter substrate-binding protein. (465 aa)

Your Current Organism:

Actinoplanes missouriensis

NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
AMIS_16960	AMIS_16970	Putative ABC transporter substrate-binding protein.	Putative ABC transporter permease protein.	0.986
AMIS_16960	AMIS_16980	Putative ABC transporter substrate-binding protein.	Putative ABC transporter permease protein.	0.983
AMIS_16960	AMIS_23480	Putative ABC transporter substrate-binding protein.	Putative ABC transporter permease protein.	0.935
AMIS_16960	AMIS_23490	Putative ABC transporter substrate-binding protein.	Putative ABC transporter permease protein.	0.928
AMIS_16960	AMIS_23500	Putative ABC transporter substrate-binding protein.	Putative ABC transporter substrate-binding protein.	0.909
AMIS_16970	AMIS_16960	Putative ABC transporter permease protein.	Putative ABC transporter substrate-binding protein.	0.986
AMIS_16970	AMIS_16980	Putative ABC transporter permease protein.	Putative ABC transporter permease protein.	0.993
AMIS_16970	AMIS_23480	Putative ABC transporter permease protein.	Putative ABC transporter permease protein.	0.972
AMIS_16970	AMIS_23490	Putative ABC transporter permease protein.	Putative ABC transporter permease protein.	0.907
AMIS_16970	AMIS_23500	Putative ABC transporter permease protein.	Putative ABC transporter substrate-binding protein.	0.949
AMIS_16980	AMIS_16960	Putative ABC transporter permease protein.	Putative ABC transporter substrate-binding protein.	0.983
AMIS_16980	AMIS_16970	Putative ABC transporter permease protein.	Putative ABC transporter permease protein.	0.993
AMIS_16980	AMIS_23480	Putative ABC transporter permease protein.	Putative ABC transporter permease protein.	0.903
AMIS_16980	AMIS_23490	Putative ABC transporter permease protein.	Putative ABC transporter permease protein.	0.972
AMIS_16980	AMIS_23500	Putative ABC transporter permease protein.	Putative ABC transporter substrate-binding protein.	0.937
AMIS_23480	AMIS_16960	Putative ABC transporter permease protein.	Putative ABC transporter substrate-binding protein.	0.935
AMIS_23480	AMIS_16970	Putative ABC transporter permease protein.	Putative ABC transporter permease protein.	0.972
AMIS_23480	AMIS_16980	Putative ABC transporter permease protein.	Putative ABC transporter permease protein.	0.903
AMIS_23480	AMIS_23490	Putative ABC transporter permease protein.	Putative ABC transporter permease protein.	0.993
AMIS_23480	AMIS_23500	Putative ABC transporter permease protein.	Putative ABC transporter substrate-binding protein.	0.985

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