11 items (Brassica rapa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M4CCG0_BRARP	RECA_2 domain-containing protein. (84 aa)
	M4CL11_BRARP	RECA_2 domain-containing protein. (370 aa)
	M4CN86_BRARP	Uncharacterized protein. (1060 aa)
	M4CRH9_BRARP	RECA_2 domain-containing protein. (331 aa)
	M4CVZ6_BRARP	Uncharacterized protein; Belongs to the RecA family. (435 aa)
	M4E644_BRARP	Uncharacterized protein. (118 aa)
	M4EEA3_BRARP	Uncharacterized protein. (1159 aa)
	M4EPI0_BRARP	RECA_2 domain-containing protein. (265 aa)
	M4F3P1_BRARP	RECA_2 domain-containing protein. (464 aa)
	M4F8G0_BRARP	Uncharacterized protein. (259 aa)
	M4F9L5_BRARP	RECA_2 domain-containing protein. (556 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4CCG0_BRARP	M4CL11_BRARP	M4CCG0	M4CL11	RECA_2 domain-containing protein.	RECA_2 domain-containing protein.	0.428
M4CCG0_BRARP	M4CN86_BRARP	M4CCG0	M4CN86	RECA_2 domain-containing protein.	Uncharacterized protein.	0.926
M4CCG0_BRARP	M4CRH9_BRARP	M4CCG0	M4CRH9	RECA_2 domain-containing protein.	RECA_2 domain-containing protein.	0.991
M4CCG0_BRARP	M4CVZ6_BRARP	M4CCG0	M4CVZ6	RECA_2 domain-containing protein.	Uncharacterized protein; Belongs to the RecA family.	0.854
M4CCG0_BRARP	M4E644_BRARP	M4CCG0	M4E644	RECA_2 domain-containing protein.	Uncharacterized protein.	0.788
M4CCG0_BRARP	M4EEA3_BRARP	M4CCG0	M4EEA3	RECA_2 domain-containing protein.	Uncharacterized protein.	0.841
M4CCG0_BRARP	M4EPI0_BRARP	M4CCG0	M4EPI0	RECA_2 domain-containing protein.	RECA_2 domain-containing protein.	0.764
M4CCG0_BRARP	M4F3P1_BRARP	M4CCG0	M4F3P1	RECA_2 domain-containing protein.	RECA_2 domain-containing protein.	0.853
M4CCG0_BRARP	M4F8G0_BRARP	M4CCG0	M4F8G0	RECA_2 domain-containing protein.	Uncharacterized protein.	0.982
M4CCG0_BRARP	M4F9L5_BRARP	M4CCG0	M4F9L5	RECA_2 domain-containing protein.	RECA_2 domain-containing protein.	0.954
M4CL11_BRARP	M4CCG0_BRARP	M4CL11	M4CCG0	RECA_2 domain-containing protein.	RECA_2 domain-containing protein.	0.428
M4CL11_BRARP	M4CN86_BRARP	M4CL11	M4CN86	RECA_2 domain-containing protein.	Uncharacterized protein.	0.926
M4CL11_BRARP	M4CRH9_BRARP	M4CL11	M4CRH9	RECA_2 domain-containing protein.	RECA_2 domain-containing protein.	0.993
M4CL11_BRARP	M4CVZ6_BRARP	M4CL11	M4CVZ6	RECA_2 domain-containing protein.	Uncharacterized protein; Belongs to the RecA family.	0.851
M4CL11_BRARP	M4E644_BRARP	M4CL11	M4E644	RECA_2 domain-containing protein.	Uncharacterized protein.	0.800
M4CL11_BRARP	M4EEA3_BRARP	M4CL11	M4EEA3	RECA_2 domain-containing protein.	Uncharacterized protein.	0.800
M4CL11_BRARP	M4EPI0_BRARP	M4CL11	M4EPI0	RECA_2 domain-containing protein.	RECA_2 domain-containing protein.	0.928
M4CL11_BRARP	M4F3P1_BRARP	M4CL11	M4F3P1	RECA_2 domain-containing protein.	RECA_2 domain-containing protein.	0.933
M4CL11_BRARP	M4F8G0_BRARP	M4CL11	M4F8G0	RECA_2 domain-containing protein.	Uncharacterized protein.	0.991
M4CL11_BRARP	M4F9L5_BRARP	M4CL11	M4F9L5	RECA_2 domain-containing protein.	RECA_2 domain-containing protein.	0.972

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