10 items (Brassica rapa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Others

textmining

co-expression

protein homology

Your Input:
	M4CEZ7_BRARP	Uncharacterized protein. (131 aa)
	M4CV65_BRARP	Uncharacterized protein. (254 aa)
	M4CWB5_BRARP	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (500 aa)
	M4DGD9_BRARP	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family. (279 aa)
	M4DJF0_BRARP	Uncharacterized protein. (135 aa)
	M4DNC2_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (406 aa)
	M4DYR2_BRARP	Trigger_N domain-containing protein. (160 aa)
	M4DZH1_BRARP	Uncharacterized protein. (151 aa)
	M4ED86_BRARP	Uncharacterized protein. (395 aa)
	M4ET54_BRARP	Uncharacterized protein. (207 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4CEZ7_BRARP	M4CV65_BRARP	M4CEZ7	M4CV65	Uncharacterized protein.	Uncharacterized protein.	0.967
M4CEZ7_BRARP	M4CWB5_BRARP	M4CEZ7	M4CWB5	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.994
M4CEZ7_BRARP	M4DGD9_BRARP	M4CEZ7	M4DGD9	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.983
M4CEZ7_BRARP	M4DJF0_BRARP	M4CEZ7	M4DJF0	Uncharacterized protein.	Uncharacterized protein.	0.973
M4CEZ7_BRARP	M4DNC2_BRARP	M4CEZ7	M4DNC2	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.974
M4CEZ7_BRARP	M4DYR2_BRARP	M4CEZ7	M4DYR2	Uncharacterized protein.	Trigger_N domain-containing protein.	0.989
M4CEZ7_BRARP	M4DZH1_BRARP	M4CEZ7	M4DZH1	Uncharacterized protein.	Uncharacterized protein.	0.989
M4CEZ7_BRARP	M4ED86_BRARP	M4CEZ7	M4ED86	Uncharacterized protein.	Uncharacterized protein.	0.961
M4CEZ7_BRARP	M4ET54_BRARP	M4CEZ7	M4ET54	Uncharacterized protein.	Uncharacterized protein.	0.989
M4CV65_BRARP	M4CEZ7_BRARP	M4CV65	M4CEZ7	Uncharacterized protein.	Uncharacterized protein.	0.967
M4CV65_BRARP	M4CWB5_BRARP	M4CV65	M4CWB5	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
M4CV65_BRARP	M4DGD9_BRARP	M4CV65	M4DGD9	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.988
M4CV65_BRARP	M4DJF0_BRARP	M4CV65	M4DJF0	Uncharacterized protein.	Uncharacterized protein.	0.982
M4CV65_BRARP	M4DNC2_BRARP	M4CV65	M4DNC2	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.969
M4CV65_BRARP	M4DYR2_BRARP	M4CV65	M4DYR2	Uncharacterized protein.	Trigger_N domain-containing protein.	0.992
M4CV65_BRARP	M4DZH1_BRARP	M4CV65	M4DZH1	Uncharacterized protein.	Uncharacterized protein.	0.985
M4CV65_BRARP	M4ED86_BRARP	M4CV65	M4ED86	Uncharacterized protein.	Uncharacterized protein.	0.972
M4CV65_BRARP	M4ET54_BRARP	M4CV65	M4ET54	Uncharacterized protein.	Uncharacterized protein.	0.983
M4CWB5_BRARP	M4CEZ7_BRARP	M4CWB5	M4CEZ7	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.994
M4CWB5_BRARP	M4CV65_BRARP	M4CWB5	M4CV65	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.999

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