5 items (Brassica rapa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

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co-expression

protein homology

Your Input:
	M4CWB5_BRARP	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (500 aa)
	M4DGD9_BRARP	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family. (279 aa)
	M4DJF0_BRARP	Uncharacterized protein. (135 aa)
	M4DNC2_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (406 aa)
	M4ET54_BRARP	Uncharacterized protein. (207 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4CWB5_BRARP	M4DGD9_BRARP	M4CWB5	M4DGD9	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.997
M4CWB5_BRARP	M4DJF0_BRARP	M4CWB5	M4DJF0	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.999
M4CWB5_BRARP	M4DNC2_BRARP	M4CWB5	M4DNC2	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.997
M4CWB5_BRARP	M4ET54_BRARP	M4CWB5	M4ET54	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.998
M4DGD9_BRARP	M4CWB5_BRARP	M4DGD9	M4CWB5	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.997
M4DGD9_BRARP	M4DJF0_BRARP	M4DGD9	M4DJF0	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.993
M4DGD9_BRARP	M4DNC2_BRARP	M4DGD9	M4DNC2	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.987
M4DGD9_BRARP	M4ET54_BRARP	M4DGD9	M4ET54	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.995
M4DJF0_BRARP	M4CWB5_BRARP	M4DJF0	M4CWB5	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
M4DJF0_BRARP	M4DGD9_BRARP	M4DJF0	M4DGD9	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.993
M4DJF0_BRARP	M4DNC2_BRARP	M4DJF0	M4DNC2	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.989
M4DJF0_BRARP	M4ET54_BRARP	M4DJF0	M4ET54	Uncharacterized protein.	Uncharacterized protein.	0.995
M4DNC2_BRARP	M4CWB5_BRARP	M4DNC2	M4CWB5	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.997
M4DNC2_BRARP	M4DGD9_BRARP	M4DNC2	M4DGD9	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.987
M4DNC2_BRARP	M4DJF0_BRARP	M4DNC2	M4DJF0	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.989
M4DNC2_BRARP	M4ET54_BRARP	M4DNC2	M4ET54	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.994
M4ET54_BRARP	M4CWB5_BRARP	M4ET54	M4CWB5	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.998
M4ET54_BRARP	M4DGD9_BRARP	M4ET54	M4DGD9	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.995
M4ET54_BRARP	M4DJF0_BRARP	M4ET54	M4DJF0	Uncharacterized protein.	Uncharacterized protein.	0.995
M4ET54_BRARP	M4DNC2_BRARP	M4ET54	M4DNC2	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.994

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