(7 nodes) Microtubule plus-end binding, and Beta tubulin network (Brassica rapa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M4CXF6_BRARP	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
	M4CXT3_BRARP	Uncharacterized protein. (1142 aa)
	M4D0U1_BRARP	Uncharacterized protein. (283 aa)
	M4D0U2_BRARP	Uncharacterized protein. (169 aa)
	M4D458_BRARP	Uncharacterized protein. (376 aa)
	M4DP89_BRARP	Uncharacterized protein. (1068 aa)
	M4DRJ5_BRARP	Uncharacterized protein. (390 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4CXF6_BRARP	M4CXT3_BRARP	M4CXF6	M4CXT3	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.469
M4CXF6_BRARP	M4D0U1_BRARP	M4CXF6	M4D0U1	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.732
M4CXF6_BRARP	M4D0U2_BRARP	M4CXF6	M4D0U2	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.732
M4CXF6_BRARP	M4D458_BRARP	M4CXF6	M4D458	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.593
M4CXF6_BRARP	M4DP89_BRARP	M4CXF6	M4DP89	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.469
M4CXF6_BRARP	M4DRJ5_BRARP	M4CXF6	M4DRJ5	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.593
M4CXT3_BRARP	M4CXF6_BRARP	M4CXT3	M4CXF6	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.469
M4CXT3_BRARP	M4D0U1_BRARP	M4CXT3	M4D0U1	Uncharacterized protein.	Uncharacterized protein.	0.690
M4CXT3_BRARP	M4D0U2_BRARP	M4CXT3	M4D0U2	Uncharacterized protein.	Uncharacterized protein.	0.690
M4D0U1_BRARP	M4CXF6_BRARP	M4D0U1	M4CXF6	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.732
M4D0U1_BRARP	M4CXT3_BRARP	M4D0U1	M4CXT3	Uncharacterized protein.	Uncharacterized protein.	0.690
M4D0U1_BRARP	M4D458_BRARP	M4D0U1	M4D458	Uncharacterized protein.	Uncharacterized protein.	0.544
M4D0U1_BRARP	M4DP89_BRARP	M4D0U1	M4DP89	Uncharacterized protein.	Uncharacterized protein.	0.690
M4D0U1_BRARP	M4DRJ5_BRARP	M4D0U1	M4DRJ5	Uncharacterized protein.	Uncharacterized protein.	0.544
M4D0U2_BRARP	M4CXF6_BRARP	M4D0U2	M4CXF6	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.732
M4D0U2_BRARP	M4CXT3_BRARP	M4D0U2	M4CXT3	Uncharacterized protein.	Uncharacterized protein.	0.690
M4D0U2_BRARP	M4D458_BRARP	M4D0U2	M4D458	Uncharacterized protein.	Uncharacterized protein.	0.544
M4D0U2_BRARP	M4DP89_BRARP	M4D0U2	M4DP89	Uncharacterized protein.	Uncharacterized protein.	0.690
M4D0U2_BRARP	M4DRJ5_BRARP	M4D0U2	M4DRJ5	Uncharacterized protein.	Uncharacterized protein.	0.544
M4D458_BRARP	M4CXF6_BRARP	M4D458	M4CXF6	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.593

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