(6 nodes) Alpha tubulin, and Tubulin complex network (Brassica rapa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M4D8W3_BRARP	Tubulin_C domain-containing protein; Belongs to the tubulin family. (233 aa)
	M4DK67_BRARP	Uncharacterized protein; Belongs to the actin family. (303 aa)
	M4DU68_BRARP	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (450 aa)
	M4F8Z7_BRARP	Uncharacterized protein. (353 aa)
	M4FEX6_BRARP	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
	M4FFW3_BRARP	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4D8W3_BRARP	M4DK67_BRARP	M4D8W3	M4DK67	Tubulin_C domain-containing protein; Belongs to the tubulin family.	Uncharacterized protein; Belongs to the actin family.	0.466
M4D8W3_BRARP	M4DU68_BRARP	M4D8W3	M4DU68	Tubulin_C domain-containing protein; Belongs to the tubulin family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.632
M4D8W3_BRARP	M4F8Z7_BRARP	M4D8W3	M4F8Z7	Tubulin_C domain-containing protein; Belongs to the tubulin family.	Uncharacterized protein.	0.512
M4D8W3_BRARP	M4FEX6_BRARP	M4D8W3	M4FEX6	Tubulin_C domain-containing protein; Belongs to the tubulin family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.703
M4DK67_BRARP	M4D8W3_BRARP	M4DK67	M4D8W3	Uncharacterized protein; Belongs to the actin family.	Tubulin_C domain-containing protein; Belongs to the tubulin family.	0.466
M4DK67_BRARP	M4DU68_BRARP	M4DK67	M4DU68	Uncharacterized protein; Belongs to the actin family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.546
M4DK67_BRARP	M4FEX6_BRARP	M4DK67	M4FEX6	Uncharacterized protein; Belongs to the actin family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.558
M4DK67_BRARP	M4FFW3_BRARP	M4DK67	M4FFW3	Uncharacterized protein; Belongs to the actin family.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.452
M4DU68_BRARP	M4D8W3_BRARP	M4DU68	M4D8W3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Tubulin_C domain-containing protein; Belongs to the tubulin family.	0.632
M4DU68_BRARP	M4DK67_BRARP	M4DU68	M4DK67	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Uncharacterized protein; Belongs to the actin family.	0.546
M4DU68_BRARP	M4F8Z7_BRARP	M4DU68	M4F8Z7	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Uncharacterized protein.	0.540
M4DU68_BRARP	M4FFW3_BRARP	M4DU68	M4FFW3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.607
M4F8Z7_BRARP	M4D8W3_BRARP	M4F8Z7	M4D8W3	Uncharacterized protein.	Tubulin_C domain-containing protein; Belongs to the tubulin family.	0.512
M4F8Z7_BRARP	M4DU68_BRARP	M4F8Z7	M4DU68	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.540
M4F8Z7_BRARP	M4FEX6_BRARP	M4F8Z7	M4FEX6	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.557
M4F8Z7_BRARP	M4FFW3_BRARP	M4F8Z7	M4FFW3	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.450
M4FEX6_BRARP	M4D8W3_BRARP	M4FEX6	M4D8W3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin_C domain-containing protein; Belongs to the tubulin family.	0.703
M4FEX6_BRARP	M4DK67_BRARP	M4FEX6	M4DK67	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein; Belongs to the actin family.	0.558
M4FEX6_BRARP	M4F8Z7_BRARP	M4FEX6	M4F8Z7	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.557
M4FEX6_BRARP	M4FFW3_BRARP	M4FEX6	M4FFW3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.681

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