STRINGSTRING
M4CD11_BRARP M4CD11_BRARP M4CFR7_BRARP M4CFR7_BRARP M4DH29_BRARP M4DH29_BRARP M4DSM1_BRARP M4DSM1_BRARP M4EC06_BRARP M4EC06_BRARP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
M4CD11_BRARPVacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (788 aa)
M4CFR7_BRARPUncharacterized protein. (302 aa)
M4DH29_BRARPVacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (807 aa)
M4DSM1_BRARPVacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. (190 aa)
M4EC06_BRARPUncharacterized protein. (303 aa)
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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