(6 nodes) Atg12-Atg5-Atg16 complex, and Autophagy-related protein 3 network (Brassica rapa)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Your Input:
	M4CWG7_BRARP	Autophagy protein 5; Required for autophagy. (335 aa)
	M4D8Z0_BRARP	Autophagy-related protein 3. (309 aa)
	M4E4A6_BRARP	Autophagy protein 5; Required for autophagy. (341 aa)
	M4EIS4_BRARP	Autophagy-related protein 3. (306 aa)
	M4FA18_BRARP	WD_REPEATS_REGION domain-containing protein. (575 aa)
	M4FA60_BRARP	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family. (85 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4CWG7_BRARP	M4D8Z0_BRARP	M4CWG7	M4D8Z0	Autophagy protein 5; Required for autophagy.	Autophagy-related protein 3.	0.998
M4CWG7_BRARP	M4E4A6_BRARP	M4CWG7	M4E4A6	Autophagy protein 5; Required for autophagy.	Autophagy protein 5; Required for autophagy.	0.900
M4CWG7_BRARP	M4EIS4_BRARP	M4CWG7	M4EIS4	Autophagy protein 5; Required for autophagy.	Autophagy-related protein 3.	0.998
M4CWG7_BRARP	M4FA18_BRARP	M4CWG7	M4FA18	Autophagy protein 5; Required for autophagy.	WD_REPEATS_REGION domain-containing protein.	0.999
M4CWG7_BRARP	M4FA60_BRARP	M4CWG7	M4FA60	Autophagy protein 5; Required for autophagy.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	0.998
M4D8Z0_BRARP	M4CWG7_BRARP	M4D8Z0	M4CWG7	Autophagy-related protein 3.	Autophagy protein 5; Required for autophagy.	0.998
M4D8Z0_BRARP	M4E4A6_BRARP	M4D8Z0	M4E4A6	Autophagy-related protein 3.	Autophagy protein 5; Required for autophagy.	0.998
M4D8Z0_BRARP	M4EIS4_BRARP	M4D8Z0	M4EIS4	Autophagy-related protein 3.	Autophagy-related protein 3.	0.901
M4D8Z0_BRARP	M4FA18_BRARP	M4D8Z0	M4FA18	Autophagy-related protein 3.	WD_REPEATS_REGION domain-containing protein.	0.998
M4D8Z0_BRARP	M4FA60_BRARP	M4D8Z0	M4FA60	Autophagy-related protein 3.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	0.998
M4E4A6_BRARP	M4CWG7_BRARP	M4E4A6	M4CWG7	Autophagy protein 5; Required for autophagy.	Autophagy protein 5; Required for autophagy.	0.900
M4E4A6_BRARP	M4D8Z0_BRARP	M4E4A6	M4D8Z0	Autophagy protein 5; Required for autophagy.	Autophagy-related protein 3.	0.998
M4E4A6_BRARP	M4EIS4_BRARP	M4E4A6	M4EIS4	Autophagy protein 5; Required for autophagy.	Autophagy-related protein 3.	0.998
M4E4A6_BRARP	M4FA18_BRARP	M4E4A6	M4FA18	Autophagy protein 5; Required for autophagy.	WD_REPEATS_REGION domain-containing protein.	0.999
M4E4A6_BRARP	M4FA60_BRARP	M4E4A6	M4FA60	Autophagy protein 5; Required for autophagy.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	0.998
M4EIS4_BRARP	M4CWG7_BRARP	M4EIS4	M4CWG7	Autophagy-related protein 3.	Autophagy protein 5; Required for autophagy.	0.998
M4EIS4_BRARP	M4D8Z0_BRARP	M4EIS4	M4D8Z0	Autophagy-related protein 3.	Autophagy-related protein 3.	0.901
M4EIS4_BRARP	M4E4A6_BRARP	M4EIS4	M4E4A6	Autophagy-related protein 3.	Autophagy protein 5; Required for autophagy.	0.998
M4EIS4_BRARP	M4FA18_BRARP	M4EIS4	M4FA18	Autophagy-related protein 3.	WD_REPEATS_REGION domain-containing protein.	0.998
M4EIS4_BRARP	M4FA60_BRARP	M4EIS4	M4FA60	Autophagy-related protein 3.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	0.998

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