(14 nodes) Protein import into peroxisome matrix network (Brassica rapa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	M4CA50_BRARP	Uncharacterized protein. (244 aa)
	M4CA76_BRARP	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (326 aa)
	M4CU14_BRARP	Pex2_Pex12 domain-containing protein. (290 aa)
	M4CU63_BRARP	Pex2_Pex12 domain-containing protein. (366 aa)
	M4CYP5_BRARP	Uncharacterized protein. (1121 aa)
	M4D0X5_BRARP	Pex14_N domain-containing protein. (531 aa)
	M4EG74_BRARP	Pex2_Pex12 domain-containing protein. (112 aa)
	M4EJH2_BRARP	TPR_REGION domain-containing protein. (730 aa)
	M4EU13_BRARP	WD_REPEATS_REGION domain-containing protein. (317 aa)
	M4EUT3_BRARP	Uncharacterized protein. (1864 aa)
	M4EX29_BRARP	AAA domain-containing protein. (1538 aa)
	M4F3G3_BRARP	Uncharacterized protein. (118 aa)
	M4F480_BRARP	Pex14_N domain-containing protein. (488 aa)
	M4FGG7_BRARP	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (381 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4CA50_BRARP	M4CA76_BRARP	M4CA50	M4CA76	Uncharacterized protein.	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.964
M4CA50_BRARP	M4CU14_BRARP	M4CA50	M4CU14	Uncharacterized protein.	Pex2_Pex12 domain-containing protein.	0.942
M4CA50_BRARP	M4CU63_BRARP	M4CA50	M4CU63	Uncharacterized protein.	Pex2_Pex12 domain-containing protein.	0.942
M4CA50_BRARP	M4CYP5_BRARP	M4CA50	M4CYP5	Uncharacterized protein.	Uncharacterized protein.	0.816
M4CA50_BRARP	M4D0X5_BRARP	M4CA50	M4D0X5	Uncharacterized protein.	Pex14_N domain-containing protein.	0.986
M4CA50_BRARP	M4EG74_BRARP	M4CA50	M4EG74	Uncharacterized protein.	Pex2_Pex12 domain-containing protein.	0.964
M4CA50_BRARP	M4EJH2_BRARP	M4CA50	M4EJH2	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.509
M4CA50_BRARP	M4EU13_BRARP	M4CA50	M4EU13	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.552
M4CA50_BRARP	M4EUT3_BRARP	M4CA50	M4EUT3	Uncharacterized protein.	Uncharacterized protein.	0.745
M4CA50_BRARP	M4EX29_BRARP	M4CA50	M4EX29	Uncharacterized protein.	AAA domain-containing protein.	0.745
M4CA50_BRARP	M4F3G3_BRARP	M4CA50	M4F3G3	Uncharacterized protein.	Uncharacterized protein.	0.509
M4CA50_BRARP	M4F480_BRARP	M4CA50	M4F480	Uncharacterized protein.	Pex14_N domain-containing protein.	0.986
M4CA50_BRARP	M4FGG7_BRARP	M4CA50	M4FGG7	Uncharacterized protein.	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.964
M4CA76_BRARP	M4CA50_BRARP	M4CA76	M4CA50	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Uncharacterized protein.	0.964
M4CA76_BRARP	M4CU14_BRARP	M4CA76	M4CU14	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Pex2_Pex12 domain-containing protein.	0.982
M4CA76_BRARP	M4CU63_BRARP	M4CA76	M4CU63	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Pex2_Pex12 domain-containing protein.	0.982
M4CA76_BRARP	M4CYP5_BRARP	M4CA76	M4CYP5	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Uncharacterized protein.	0.951
M4CA76_BRARP	M4D0X5_BRARP	M4CA76	M4D0X5	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Pex14_N domain-containing protein.	0.965
M4CA76_BRARP	M4EG74_BRARP	M4CA76	M4EG74	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Pex2_Pex12 domain-containing protein.	0.540
M4CA76_BRARP	M4EJH2_BRARP	M4CA76	M4EJH2	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	TPR_REGION domain-containing protein.	0.972

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