(25 nodes) Leucine-rich repeats, typical (most populated) subfamily, and Leucine Rich Repeat network (Brassica rapa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M4CB80_BRARP	LRRNT_2 domain-containing protein. (372 aa)
	M4CP22_BRARP	Uncharacterized protein. (262 aa)
	M4CV93_BRARP	LRRNT_2 domain-containing protein. (661 aa)
	M4CX26_BRARP	Protein kinase domain-containing protein. (699 aa)
	M4CXI3_BRARP	Uncharacterized protein. (629 aa)
	M4CYD7_BRARP	LRRNT_2 domain-containing protein. (331 aa)
	M4CYD9_BRARP	LRRNT_2 domain-containing protein. (334 aa)
	M4CYE0_BRARP	LRRNT_2 domain-containing protein. (336 aa)
	M4D1Z6_BRARP	TIR domain-containing protein. (1184 aa)
	M4DBT4_BRARP	Uncharacterized protein. (398 aa)
	M4DFV9_BRARP	Uncharacterized protein. (544 aa)
	M4DHF2_BRARP	LRRNT_2 domain-containing protein. (925 aa)
	M4DHF3_BRARP	LRRNT_2 domain-containing protein. (879 aa)
	M4DNH0_BRARP	Uncharacterized protein. (270 aa)
	M4DRI3_BRARP	Uncharacterized protein. (395 aa)
	M4DSB6_BRARP	TIR domain-containing protein. (1338 aa)
	M4E571_BRARP	LRRNT_2 domain-containing protein. (376 aa)
	M4E8P8_BRARP	Uncharacterized protein. (474 aa)
	M4EHZ9_BRARP	Uncharacterized protein. (315 aa)
	M4EIR5_BRARP	Uncharacterized protein. (264 aa)
	M4EUK4_BRARP	Uncharacterized protein. (749 aa)
	M4EVB4_BRARP	LRRNT_2 domain-containing protein. (826 aa)
	M4EZC0_BRARP	Uncharacterized protein. (586 aa)
	M4F1A3_BRARP	Uncharacterized protein. (497 aa)
	M4F5Q7_BRARP	TIR domain-containing protein. (1048 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4CB80_BRARP	M4DBT4_BRARP	M4CB80	M4DBT4	LRRNT_2 domain-containing protein.	Uncharacterized protein.	0.520
M4CB80_BRARP	M4DRI3_BRARP	M4CB80	M4DRI3	LRRNT_2 domain-containing protein.	Uncharacterized protein.	0.522
M4CP22_BRARP	M4CV93_BRARP	M4CP22	M4CV93	Uncharacterized protein.	LRRNT_2 domain-containing protein.	0.504
M4CP22_BRARP	M4CXI3_BRARP	M4CP22	M4CXI3	Uncharacterized protein.	Uncharacterized protein.	0.507
M4CP22_BRARP	M4CYD7_BRARP	M4CP22	M4CYD7	Uncharacterized protein.	LRRNT_2 domain-containing protein.	0.481
M4CP22_BRARP	M4CYD9_BRARP	M4CP22	M4CYD9	Uncharacterized protein.	LRRNT_2 domain-containing protein.	0.452
M4CP22_BRARP	M4CYE0_BRARP	M4CP22	M4CYE0	Uncharacterized protein.	LRRNT_2 domain-containing protein.	0.487
M4CP22_BRARP	M4D1Z6_BRARP	M4CP22	M4D1Z6	Uncharacterized protein.	TIR domain-containing protein.	0.468
M4CP22_BRARP	M4DFV9_BRARP	M4CP22	M4DFV9	Uncharacterized protein.	Uncharacterized protein.	0.525
M4CP22_BRARP	M4DHF2_BRARP	M4CP22	M4DHF2	Uncharacterized protein.	LRRNT_2 domain-containing protein.	0.466
M4CP22_BRARP	M4DHF3_BRARP	M4CP22	M4DHF3	Uncharacterized protein.	LRRNT_2 domain-containing protein.	0.478
M4CP22_BRARP	M4DNH0_BRARP	M4CP22	M4DNH0	Uncharacterized protein.	Uncharacterized protein.	0.423
M4CP22_BRARP	M4DSB6_BRARP	M4CP22	M4DSB6	Uncharacterized protein.	TIR domain-containing protein.	0.477
M4CP22_BRARP	M4E571_BRARP	M4CP22	M4E571	Uncharacterized protein.	LRRNT_2 domain-containing protein.	0.499
M4CP22_BRARP	M4EHZ9_BRARP	M4CP22	M4EHZ9	Uncharacterized protein.	Uncharacterized protein.	0.532
M4CP22_BRARP	M4EUK4_BRARP	M4CP22	M4EUK4	Uncharacterized protein.	Uncharacterized protein.	0.497
M4CP22_BRARP	M4EVB4_BRARP	M4CP22	M4EVB4	Uncharacterized protein.	LRRNT_2 domain-containing protein.	0.477
M4CP22_BRARP	M4EZC0_BRARP	M4CP22	M4EZC0	Uncharacterized protein.	Uncharacterized protein.	0.514
M4CP22_BRARP	M4F5Q7_BRARP	M4CP22	M4F5Q7	Uncharacterized protein.	TIR domain-containing protein.	0.413
M4CV93_BRARP	M4CP22_BRARP	M4CV93	M4CP22	LRRNT_2 domain-containing protein.	Uncharacterized protein.	0.504

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