125 items (Brassica rapa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M4C7V0_BRARP	Uncharacterized protein. (388 aa)
	M4C9C8_BRARP	Uncharacterized protein. (597 aa)
	M4C9J8_BRARP	Uncharacterized protein. (463 aa)
	M4CA45_BRARP	Uncharacterized protein. (130 aa)
	M4CAM4_BRARP	Uncharacterized protein. (169 aa)
	M4CBX4_BRARP	Uncharacterized protein. (840 aa)
	M4CC65_BRARP	Uncharacterized protein. (668 aa)
	M4CD79_BRARP	Uncharacterized protein. (434 aa)
	M4CF27_BRARP	Uncharacterized protein. (422 aa)
	M4CFP3_BRARP	bHLH-MYC_N domain-containing protein. (267 aa)
	M4CGG2_BRARP	Uncharacterized protein. (246 aa)
	M4CHX1_BRARP	Uncharacterized protein. (457 aa)
	M4CIA5_BRARP	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (546 aa)
	M4CIL9_BRARP	Uncharacterized protein. (618 aa)
	M4CJ95_BRARP	Uncharacterized protein. (625 aa)
	M4CJI9_BRARP	RING-type domain-containing protein. (244 aa)
	M4CJM6_BRARP	Uncharacterized protein. (127 aa)
	M4CKE6_BRARP	Uncharacterized protein. (566 aa)
	M4CKS9_BRARP	Uncharacterized protein. (341 aa)
	M4CKT3_BRARP	Uncharacterized protein. (398 aa)
	M4CKU1_BRARP	Uncharacterized protein. (383 aa)
	M4CLU6_BRARP	Uncharacterized protein. (493 aa)
	M4CMB8_BRARP	Uncharacterized protein. (374 aa)
	M4CMG0_BRARP	Uncharacterized protein. (849 aa)
	M4CMP6_BRARP	Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family. (383 aa)
	M4CN88_BRARP	Uncharacterized protein. (170 aa)
	M4CND9_BRARP	Uncharacterized protein. (506 aa)
	M4CPH5_BRARP	Uncharacterized protein. (386 aa)
	M4CTE9_BRARP	Uncharacterized protein. (604 aa)
	M4CU02_BRARP	Uncharacterized protein. (456 aa)
	M4CV99_BRARP	Uncharacterized protein. (223 aa)
	M4CWI6_BRARP	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (1143 aa)
	M4CX68_BRARP	Uncharacterized protein; Belongs to the NPH3 family. (607 aa)
	M4CZJ4_BRARP	Uncharacterized protein. (170 aa)
	M4D0L7_BRARP	Uncharacterized protein. (540 aa)
	M4D1R1_BRARP	Uncharacterized protein. (663 aa)
	M4D3C4_BRARP	Uncharacterized protein. (611 aa)
	M4D5Z2_BRARP	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (1097 aa)
	M4D6H3_BRARP	Uncharacterized protein; Belongs to the NPH3 family. (669 aa)
	M4D6R9_BRARP	Uncharacterized protein. (407 aa)
	M4D7N3_BRARP	Uncharacterized protein. (613 aa)
	M4D7W0_BRARP	BES1_N domain-containing protein. (276 aa)
	M4D933_BRARP	Uncharacterized protein. (206 aa)
	M4D9U9_BRARP	Ig-like domain-containing protein. (405 aa)
	M4DA49_BRARP	BES1_N domain-containing protein. (276 aa)
	M4DA69_BRARP	Uncharacterized protein; Belongs to the GDA1/CD39 NTPase family. (624 aa)
	M4DD28_BRARP	Uncharacterized protein. (459 aa)
	M4DDE9_BRARP	Uncharacterized protein. (538 aa)
	M4DDF0_BRARP	Uncharacterized protein. (376 aa)
	M4DDN6_BRARP	Dilute domain-containing protein. (583 aa)
	M4DDP4_BRARP	Uncharacterized protein. (364 aa)
	M4DET8_BRARP	PRONE domain-containing protein. (547 aa)
	M4DF73_BRARP	Uncharacterized protein. (561 aa)
	M4DFX8_BRARP	Uncharacterized protein. (720 aa)
	M4DGZ4_BRARP	Uncharacterized protein. (581 aa)
	M4DHD8_BRARP	Uncharacterized protein. (456 aa)
	M4DIN9_BRARP	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (584 aa)
	M4DJD1_BRARP	Uncharacterized protein. (546 aa)
	M4DJF1_BRARP	Uncharacterized protein. (470 aa)
	M4DJN2_BRARP	Uncharacterized protein. (407 aa)
	M4DJX4_BRARP	Uncharacterized protein. (376 aa)
	M4DKU5_BRARP	Uncharacterized protein. (166 aa)
	M4DLZ3_BRARP	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (300 aa)
	M4DPR7_BRARP	Uncharacterized protein. (109 aa)
	M4DPV4_BRARP	Uncharacterized protein. (462 aa)
	M4DPX7_BRARP	Uncharacterized protein. (184 aa)
	M4DT37_BRARP	Uncharacterized protein. (512 aa)
	M4DW04_BRARP	Uncharacterized protein. (172 aa)
	M4DW85_BRARP	Uncharacterized protein. (303 aa)
	M4DWH8_BRARP	Uncharacterized protein. (748 aa)
	M4DXG2_BRARP	Uncharacterized protein. (667 aa)
	M4DXY1_BRARP	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (1151 aa)
	M4DZH9_BRARP	Uncharacterized protein. (843 aa)
	M4DZS9_BRARP	Uncharacterized protein. (141 aa)
	M4DZW8_BRARP	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (298 aa)
	M4E0F5_BRARP	Uncharacterized protein. (216 aa)
	M4E0M0_BRARP	CRM domain-containing protein. (152 aa)
	M4E167_BRARP	Uncharacterized protein. (529 aa)
	M4E1N0_BRARP	bHLH-MYC_N domain-containing protein. (372 aa)
	M4E2K5_BRARP	Uncharacterized protein. (376 aa)
	M4E2K6_BRARP	PPC domain-containing protein. (339 aa)
	M4E485_BRARP	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (1140 aa)
	M4E4H2_BRARP	Uncharacterized protein. (432 aa)
	M4E587_BRARP	Uncharacterized protein. (672 aa)
	M4E7M9_BRARP	Uncharacterized protein. (564 aa)
	M4E7U8_BRARP	Uncharacterized protein. (630 aa)
	M4E8C3_BRARP	Uncharacterized protein. (144 aa)
	M4E8U6_BRARP	Uncharacterized protein. (554 aa)
	M4E967_BRARP	Uncharacterized protein. (675 aa)
	M4EAL7_BRARP	Uncharacterized protein. (565 aa)
	M4EAQ0_BRARP	Uncharacterized protein. (453 aa)
	M4EC69_BRARP	Uncharacterized protein. (653 aa)
	M4EDE0_BRARP	Uncharacterized protein. (601 aa)
	M4EDJ8_BRARP	Uncharacterized protein. (515 aa)
	M4EF64_BRARP	Uncharacterized protein. (422 aa)
	M4EG70_BRARP	Uncharacterized protein. (266 aa)
	M4EHX3_BRARP	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family. (699 aa)
	M4EK25_BRARP	Uncharacterized protein. (328 aa)
	M4EL60_BRARP	Uncharacterized protein. (745 aa)
	M4EPZ5_BRARP	Uncharacterized protein. (422 aa)
	M4EQM1_BRARP	Uncharacterized protein. (104 aa)
	M4ET82_BRARP	Uncharacterized protein. (179 aa)
	M4ET92_BRARP	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (1146 aa)
	M4ETT6_BRARP	Lipase_GDSL domain-containing protein; Belongs to the 'GDSL' lipolytic enzyme family. (283 aa)
	M4EUJ6_BRARP	Uncharacterized protein. (719 aa)
	M4EVF1_BRARP	Uncharacterized protein. (596 aa)
	M4EW56_BRARP	Uncharacterized protein. (326 aa)
	M4EXL7_BRARP	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (1110 aa)
	M4EZJ7_BRARP	Uncharacterized protein. (533 aa)
	M4F3K5_BRARP	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family. (663 aa)
	M4F3W8_BRARP	Uncharacterized protein. (380 aa)
	M4F4F1_BRARP	COBRA-like protein; Belongs to the COBRA family. (458 aa)
	M4F4X0_BRARP	Uncharacterized protein. (533 aa)
	M4F5A6_BRARP	Uncharacterized protein. (462 aa)
	M4F5W1_BRARP	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family. (585 aa)
	M4F6H0_BRARP	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family. (599 aa)
	M4F6Z8_BRARP	Uncharacterized protein; Belongs to the NPH3 family. (574 aa)
	M4F7N8_BRARP	Uncharacterized protein. (80 aa)
	M4F998_BRARP	Uncharacterized protein. (475 aa)
	M4FD91_BRARP	Uncharacterized protein. (676 aa)
	M4FEQ3_BRARP	Uncharacterized protein. (72 aa)
	M4FF19_BRARP	Uncharacterized protein. (543 aa)
	M4FI58_BRARP	Uncharacterized protein. (165 aa)
	M4FIK3_BRARP	Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily. (241 aa)
	M4FIS6_BRARP	Methyltransferase. (638 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4C9C8_BRARP	M4CND9_BRARP	M4C9C8	M4CND9	Uncharacterized protein.	Uncharacterized protein.	0.434
M4C9C8_BRARP	M4CV99_BRARP	M4C9C8	M4CV99	Uncharacterized protein.	Uncharacterized protein.	0.423
M4C9C8_BRARP	M4D933_BRARP	M4C9C8	M4D933	Uncharacterized protein.	Uncharacterized protein.	0.457
M4C9C8_BRARP	M4D9U9_BRARP	M4C9C8	M4D9U9	Uncharacterized protein.	Ig-like domain-containing protein.	0.406
M4C9C8_BRARP	M4DPX7_BRARP	M4C9C8	M4DPX7	Uncharacterized protein.	Uncharacterized protein.	0.422
M4C9C8_BRARP	M4DXG2_BRARP	M4C9C8	M4DXG2	Uncharacterized protein.	Uncharacterized protein.	0.438
M4C9C8_BRARP	M4E2K5_BRARP	M4C9C8	M4E2K5	Uncharacterized protein.	Uncharacterized protein.	0.404
M4C9C8_BRARP	M4EAQ0_BRARP	M4C9C8	M4EAQ0	Uncharacterized protein.	Uncharacterized protein.	0.426
M4C9C8_BRARP	M4EDE0_BRARP	M4C9C8	M4EDE0	Uncharacterized protein.	Uncharacterized protein.	0.404
M4C9C8_BRARP	M4F4F1_BRARP	M4C9C8	M4F4F1	Uncharacterized protein.	COBRA-like protein; Belongs to the COBRA family.	0.478
M4C9C8_BRARP	M4F7N8_BRARP	M4C9C8	M4F7N8	Uncharacterized protein.	Uncharacterized protein.	0.404
M4C9C8_BRARP	M4FEQ3_BRARP	M4C9C8	M4FEQ3	Uncharacterized protein.	Uncharacterized protein.	0.401
M4C9J8_BRARP	M4CLU6_BRARP	M4C9J8	M4CLU6	Uncharacterized protein.	Uncharacterized protein.	0.445
M4C9J8_BRARP	M4CND9_BRARP	M4C9J8	M4CND9	Uncharacterized protein.	Uncharacterized protein.	0.442
M4C9J8_BRARP	M4CWI6_BRARP	M4C9J8	M4CWI6	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	0.432
M4C9J8_BRARP	M4DIN9_BRARP	M4C9J8	M4DIN9	Uncharacterized protein.	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.	0.407
M4C9J8_BRARP	M4DJF1_BRARP	M4C9J8	M4DJF1	Uncharacterized protein.	Uncharacterized protein.	0.422
M4C9J8_BRARP	M4DXG2_BRARP	M4C9J8	M4DXG2	Uncharacterized protein.	Uncharacterized protein.	0.427
M4C9J8_BRARP	M4DZS9_BRARP	M4C9J8	M4DZS9	Uncharacterized protein.	Uncharacterized protein.	0.404
M4C9J8_BRARP	M4E485_BRARP	M4C9J8	M4E485	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	0.431

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