70 items (Brassica rapa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M4C9J8_BRARP	Uncharacterized protein. (463 aa)
	M4CA45_BRARP	Uncharacterized protein. (130 aa)
	M4CAM4_BRARP	Uncharacterized protein. (169 aa)
	M4CBX4_BRARP	Uncharacterized protein. (840 aa)
	M4CC65_BRARP	Uncharacterized protein. (668 aa)
	M4CF27_BRARP	Uncharacterized protein. (422 aa)
	M4CIA5_BRARP	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (546 aa)
	M4CIL9_BRARP	Uncharacterized protein. (618 aa)
	M4CJ95_BRARP	Uncharacterized protein. (625 aa)
	M4CJI9_BRARP	RING-type domain-containing protein. (244 aa)
	M4CJM6_BRARP	Uncharacterized protein. (127 aa)
	M4CKE6_BRARP	Uncharacterized protein. (566 aa)
	M4CKS9_BRARP	Uncharacterized protein. (341 aa)
	M4CLU6_BRARP	Uncharacterized protein. (493 aa)
	M4CMB8_BRARP	Uncharacterized protein. (374 aa)
	M4CMG0_BRARP	Uncharacterized protein. (849 aa)
	M4CND9_BRARP	Uncharacterized protein. (506 aa)
	M4CTE9_BRARP	Uncharacterized protein. (604 aa)
	M4CWI6_BRARP	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (1143 aa)
	M4D3C4_BRARP	Uncharacterized protein. (611 aa)
	M4D5Z2_BRARP	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (1097 aa)
	M4D7N3_BRARP	Uncharacterized protein. (613 aa)
	M4D7W0_BRARP	BES1_N domain-containing protein. (276 aa)
	M4D933_BRARP	Uncharacterized protein. (206 aa)
	M4D9U9_BRARP	Ig-like domain-containing protein. (405 aa)
	M4DA49_BRARP	BES1_N domain-containing protein. (276 aa)
	M4DDE9_BRARP	Uncharacterized protein. (538 aa)
	M4DDF0_BRARP	Uncharacterized protein. (376 aa)
	M4DDN6_BRARP	Dilute domain-containing protein. (583 aa)
	M4DET8_BRARP	PRONE domain-containing protein. (547 aa)
	M4DGZ4_BRARP	Uncharacterized protein. (581 aa)
	M4DIN9_BRARP	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (584 aa)
	M4DJN2_BRARP	Uncharacterized protein. (407 aa)
	M4DPR7_BRARP	Uncharacterized protein. (109 aa)
	M4DPX7_BRARP	Uncharacterized protein. (184 aa)
	M4DW04_BRARP	Uncharacterized protein. (172 aa)
	M4DWH8_BRARP	Uncharacterized protein. (748 aa)
	M4DXG2_BRARP	Uncharacterized protein. (667 aa)
	M4DXY1_BRARP	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (1151 aa)
	M4DZH9_BRARP	Uncharacterized protein. (843 aa)
	M4DZS9_BRARP	Uncharacterized protein. (141 aa)
	M4E0F5_BRARP	Uncharacterized protein. (216 aa)
	M4E0M0_BRARP	CRM domain-containing protein. (152 aa)
	M4E2K5_BRARP	Uncharacterized protein. (376 aa)
	M4E2K6_BRARP	PPC domain-containing protein. (339 aa)
	M4E485_BRARP	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (1140 aa)
	M4E587_BRARP	Uncharacterized protein. (672 aa)
	M4E7U8_BRARP	Uncharacterized protein. (630 aa)
	M4E8C3_BRARP	Uncharacterized protein. (144 aa)
	M4EAL7_BRARP	Uncharacterized protein. (565 aa)
	M4EAQ0_BRARP	Uncharacterized protein. (453 aa)
	M4EDE0_BRARP	Uncharacterized protein. (601 aa)
	M4EF64_BRARP	Uncharacterized protein. (422 aa)
	M4EK25_BRARP	Uncharacterized protein. (328 aa)
	M4EL60_BRARP	Uncharacterized protein. (745 aa)
	M4EPZ5_BRARP	Uncharacterized protein. (422 aa)
	M4EQM1_BRARP	Uncharacterized protein. (104 aa)
	M4ET82_BRARP	Uncharacterized protein. (179 aa)
	M4ET92_BRARP	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (1146 aa)
	M4EUJ6_BRARP	Uncharacterized protein. (719 aa)
	M4EVF1_BRARP	Uncharacterized protein. (596 aa)
	M4EXL7_BRARP	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (1110 aa)
	M4EZJ7_BRARP	Uncharacterized protein. (533 aa)
	M4F4F1_BRARP	COBRA-like protein; Belongs to the COBRA family. (458 aa)
	M4F5A6_BRARP	Uncharacterized protein. (462 aa)
	M4F7N8_BRARP	Uncharacterized protein. (80 aa)
	M4FEQ3_BRARP	Uncharacterized protein. (72 aa)
	M4FI58_BRARP	Uncharacterized protein. (165 aa)
	M4FIK3_BRARP	Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily. (241 aa)
	M4FIS6_BRARP	Methyltransferase. (638 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4C9J8_BRARP	M4CLU6_BRARP	M4C9J8	M4CLU6	Uncharacterized protein.	Uncharacterized protein.	0.445
M4C9J8_BRARP	M4CND9_BRARP	M4C9J8	M4CND9	Uncharacterized protein.	Uncharacterized protein.	0.442
M4C9J8_BRARP	M4CWI6_BRARP	M4C9J8	M4CWI6	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	0.432
M4C9J8_BRARP	M4DIN9_BRARP	M4C9J8	M4DIN9	Uncharacterized protein.	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.	0.407
M4C9J8_BRARP	M4DXG2_BRARP	M4C9J8	M4DXG2	Uncharacterized protein.	Uncharacterized protein.	0.427
M4C9J8_BRARP	M4DZS9_BRARP	M4C9J8	M4DZS9	Uncharacterized protein.	Uncharacterized protein.	0.404
M4C9J8_BRARP	M4E485_BRARP	M4C9J8	M4E485	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	0.431
M4C9J8_BRARP	M4EAQ0_BRARP	M4C9J8	M4EAQ0	Uncharacterized protein.	Uncharacterized protein.	0.440
M4C9J8_BRARP	M4EZJ7_BRARP	M4C9J8	M4EZJ7	Uncharacterized protein.	Uncharacterized protein.	0.446
M4C9J8_BRARP	M4F4F1_BRARP	M4C9J8	M4F4F1	Uncharacterized protein.	COBRA-like protein; Belongs to the COBRA family.	0.448
M4C9J8_BRARP	M4F7N8_BRARP	M4C9J8	M4F7N8	Uncharacterized protein.	Uncharacterized protein.	0.403
M4CA45_BRARP	M4CBX4_BRARP	M4CA45	M4CBX4	Uncharacterized protein.	Uncharacterized protein.	0.424
M4CA45_BRARP	M4CC65_BRARP	M4CA45	M4CC65	Uncharacterized protein.	Uncharacterized protein.	0.438
M4CA45_BRARP	M4CIL9_BRARP	M4CA45	M4CIL9	Uncharacterized protein.	Uncharacterized protein.	0.466
M4CA45_BRARP	M4CJ95_BRARP	M4CA45	M4CJ95	Uncharacterized protein.	Uncharacterized protein.	0.468
M4CA45_BRARP	M4CJI9_BRARP	M4CA45	M4CJI9	Uncharacterized protein.	RING-type domain-containing protein.	0.423
M4CA45_BRARP	M4CJM6_BRARP	M4CA45	M4CJM6	Uncharacterized protein.	Uncharacterized protein.	0.516
M4CA45_BRARP	M4CLU6_BRARP	M4CA45	M4CLU6	Uncharacterized protein.	Uncharacterized protein.	0.495
M4CA45_BRARP	M4CMB8_BRARP	M4CA45	M4CMB8	Uncharacterized protein.	Uncharacterized protein.	0.443
M4CA45_BRARP	M4CND9_BRARP	M4CA45	M4CND9	Uncharacterized protein.	Uncharacterized protein.	0.452

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