(37 nodes) Mixed, incl. Amino acid transporter, transmembrane domain, and Ethylene-responsive protein kinase Le-CTR1 network (Brassica rapa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M4C7I2_BRARP	Aa_trans domain-containing protein. (454 aa)
	M4C8Q6_BRARP	Aa_trans domain-containing protein. (483 aa)
	M4C8R6_BRARP	Endoglucanase. (621 aa)
	M4CHJ1_BRARP	Aa_trans domain-containing protein. (471 aa)
	M4CI50_BRARP	AP2/ERF domain-containing protein. (243 aa)
	M4CLH4_BRARP	Aa_trans domain-containing protein. (461 aa)
	M4CPI4_BRARP	Protein kinase domain-containing protein. (1044 aa)
	M4CVS8_BRARP	Aa_trans domain-containing protein. (472 aa)
	M4CZI9_BRARP	Aa_trans domain-containing protein. (495 aa)
	M4CZL7_BRARP	Uncharacterized protein. (94 aa)
	M4D095_BRARP	Uncharacterized protein. (75 aa)
	M4D5I6_BRARP	CBS domain-containing protein. (54 aa)
	M4D9C6_BRARP	Uncharacterized protein. (557 aa)
	M4DB89_BRARP	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (590 aa)
	M4DBE6_BRARP	Protein kinase domain-containing protein. (951 aa)
	M4DRW0_BRARP	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (471 aa)
	M4DRW1_BRARP	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (217 aa)
	M4DXS0_BRARP	Uncharacterized protein. (263 aa)
	M4E0T1_BRARP	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (349 aa)
	M4E2F4_BRARP	SBP-type domain-containing protein. (69 aa)
	M4E3J5_BRARP	Protein kinase domain-containing protein. (890 aa)
	M4E666_BRARP	Uncharacterized protein; Belongs to the endosulfine family. (108 aa)
	M4E9U1_BRARP	Aa_trans domain-containing protein. (442 aa)
	M4EI62_BRARP	Uncharacterized protein. (520 aa)
	M4EL39_BRARP	Uncharacterized protein. (169 aa)
	M4EMK4_BRARP	Aa_trans domain-containing protein. (436 aa)
	M4ENS1_BRARP	Uncharacterized protein. (423 aa)
	M4EQT5_BRARP	Aa_trans domain-containing protein. (483 aa)
	M4ETX8_BRARP	Aa_trans domain-containing protein. (584 aa)
	M4EVH4_BRARP	Aa_trans domain-containing protein. (441 aa)
	M4EWA1_BRARP	KA1 domain-containing protein. (149 aa)
	M4EYU4_BRARP	Aa_trans domain-containing protein. (441 aa)
	M4EZG2_BRARP	Uncharacterized protein. (610 aa)
	M4F703_BRARP	AB hydrolase-1 domain-containing protein. (407 aa)
	M4F9T1_BRARP	Uncharacterized protein. (231 aa)
	M4FDB6_BRARP	Aa_trans domain-containing protein. (424 aa)
	M4FDT3_BRARP	ABC_trans_N domain-containing protein. (199 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4C7I2_BRARP	M4C8R6_BRARP	M4C7I2	M4C8R6	Aa_trans domain-containing protein.	Endoglucanase.	0.782
M4C7I2_BRARP	M4CI50_BRARP	M4C7I2	M4CI50	Aa_trans domain-containing protein.	AP2/ERF domain-containing protein.	0.456
M4C7I2_BRARP	M4CZL7_BRARP	M4C7I2	M4CZL7	Aa_trans domain-containing protein.	Uncharacterized protein.	0.410
M4C7I2_BRARP	M4DBE6_BRARP	M4C7I2	M4DBE6	Aa_trans domain-containing protein.	Protein kinase domain-containing protein.	0.484
M4C7I2_BRARP	M4DXS0_BRARP	M4C7I2	M4DXS0	Aa_trans domain-containing protein.	Uncharacterized protein.	0.507
M4C7I2_BRARP	M4E9U1_BRARP	M4C7I2	M4E9U1	Aa_trans domain-containing protein.	Aa_trans domain-containing protein.	0.506
M4C7I2_BRARP	M4EI62_BRARP	M4C7I2	M4EI62	Aa_trans domain-containing protein.	Uncharacterized protein.	0.498
M4C7I2_BRARP	M4EMK4_BRARP	M4C7I2	M4EMK4	Aa_trans domain-containing protein.	Aa_trans domain-containing protein.	0.513
M4C7I2_BRARP	M4ETX8_BRARP	M4C7I2	M4ETX8	Aa_trans domain-containing protein.	Aa_trans domain-containing protein.	0.493
M4C7I2_BRARP	M4EVH4_BRARP	M4C7I2	M4EVH4	Aa_trans domain-containing protein.	Aa_trans domain-containing protein.	0.517
M4C7I2_BRARP	M4EYU4_BRARP	M4C7I2	M4EYU4	Aa_trans domain-containing protein.	Aa_trans domain-containing protein.	0.503
M4C7I2_BRARP	M4F703_BRARP	M4C7I2	M4F703	Aa_trans domain-containing protein.	AB hydrolase-1 domain-containing protein.	0.582
M4C7I2_BRARP	M4FDB6_BRARP	M4C7I2	M4FDB6	Aa_trans domain-containing protein.	Aa_trans domain-containing protein.	0.501
M4C7I2_BRARP	M4FDT3_BRARP	M4C7I2	M4FDT3	Aa_trans domain-containing protein.	ABC_trans_N domain-containing protein.	0.470
M4C8Q6_BRARP	M4CZL7_BRARP	M4C8Q6	M4CZL7	Aa_trans domain-containing protein.	Uncharacterized protein.	0.404
M4C8Q6_BRARP	M4D9C6_BRARP	M4C8Q6	M4D9C6	Aa_trans domain-containing protein.	Uncharacterized protein.	0.438
M4C8Q6_BRARP	M4DBE6_BRARP	M4C8Q6	M4DBE6	Aa_trans domain-containing protein.	Protein kinase domain-containing protein.	0.462
M4C8Q6_BRARP	M4DXS0_BRARP	M4C8Q6	M4DXS0	Aa_trans domain-containing protein.	Uncharacterized protein.	0.490
M4C8Q6_BRARP	M4E9U1_BRARP	M4C8Q6	M4E9U1	Aa_trans domain-containing protein.	Aa_trans domain-containing protein.	0.500
M4C8Q6_BRARP	M4EI62_BRARP	M4C8Q6	M4EI62	Aa_trans domain-containing protein.	Uncharacterized protein.	0.492

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