(11 nodes) Endoplasmic reticulum chaperone complex, and KEN domain network (Brassica rapa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M4CAT5_BRARP	TOG domain-containing protein. (358 aa)
	M4D886_BRARP	Uncharacterized protein. (869 aa)
	M4DEX5_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (666 aa)
	M4E219_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (669 aa)
	M4E2V9_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (642 aa)
	M4E6V6_BRARP	Uncharacterized protein. (815 aa)
	M4EIA6_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (665 aa)
	M4ELU1_BRARP	TOG domain-containing protein. (367 aa)
	M4ES79_BRARP	Uncharacterized protein; Belongs to the heat shock protein 70 family. (673 aa)
	M4FBM8_BRARP	Uncharacterized protein. (190 aa)
	M4FBN0_BRARP	Uncharacterized protein. (846 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4CAT5_BRARP	M4D886_BRARP	M4CAT5	M4D886	TOG domain-containing protein.	Uncharacterized protein.	0.967
M4CAT5_BRARP	M4DEX5_BRARP	M4CAT5	M4DEX5	TOG domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.853
M4CAT5_BRARP	M4E219_BRARP	M4CAT5	M4E219	TOG domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.853
M4CAT5_BRARP	M4E2V9_BRARP	M4CAT5	M4E2V9	TOG domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.853
M4CAT5_BRARP	M4EIA6_BRARP	M4CAT5	M4EIA6	TOG domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.853
M4CAT5_BRARP	M4ES79_BRARP	M4CAT5	M4ES79	TOG domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.853
M4CAT5_BRARP	M4FBN0_BRARP	M4CAT5	M4FBN0	TOG domain-containing protein.	Uncharacterized protein.	0.967
M4D886_BRARP	M4CAT5_BRARP	M4D886	M4CAT5	Uncharacterized protein.	TOG domain-containing protein.	0.967
M4D886_BRARP	M4DEX5_BRARP	M4D886	M4DEX5	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.999
M4D886_BRARP	M4E219_BRARP	M4D886	M4E219	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.999
M4D886_BRARP	M4E2V9_BRARP	M4D886	M4E2V9	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.999
M4D886_BRARP	M4E6V6_BRARP	M4D886	M4E6V6	Uncharacterized protein.	Uncharacterized protein.	0.636
M4D886_BRARP	M4EIA6_BRARP	M4D886	M4EIA6	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.999
M4D886_BRARP	M4ELU1_BRARP	M4D886	M4ELU1	Uncharacterized protein.	TOG domain-containing protein.	0.967
M4D886_BRARP	M4ES79_BRARP	M4D886	M4ES79	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.999
M4D886_BRARP	M4FBM8_BRARP	M4D886	M4FBM8	Uncharacterized protein.	Uncharacterized protein.	0.636
M4D886_BRARP	M4FBN0_BRARP	M4D886	M4FBN0	Uncharacterized protein.	Uncharacterized protein.	0.825
M4DEX5_BRARP	M4CAT5_BRARP	M4DEX5	M4CAT5	Uncharacterized protein; Belongs to the heat shock protein 70 family.	TOG domain-containing protein.	0.853
M4DEX5_BRARP	M4D886_BRARP	M4DEX5	M4D886	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.999
M4DEX5_BRARP	M4E219_BRARP	M4DEX5	M4E219	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.543

page 1 of 5

Server load: low (22%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About