96 items (Brassica rapa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M4CZ04_BRARP	Uncharacterized protein. (133 aa)
	M4EPG7_BRARP	Uncharacterized protein. (85 aa)
	M4EPJ5_BRARP	Uncharacterized protein. (107 aa)
	M4ER18_BRARP	Uncharacterized protein. (140 aa)
	M4ERZ3_BRARP	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
	M4ETW5_BRARP	Uncharacterized protein. (672 aa)
	M4EY76_BRARP	Uncharacterized protein; Belongs to the E2F/DP family. (557 aa)
	M4EZ80_BRARP	Uncharacterized protein. (126 aa)
	M4F119_BRARP	Uncharacterized protein. (1016 aa)
	M4F1W5_BRARP	TPR_REGION domain-containing protein. (544 aa)
	M4F3L3_BRARP	Uncharacterized protein. (134 aa)
	M4F573_BRARP	Uncharacterized protein. (198 aa)
	MCM7-2	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (711 aa)
	MCM7	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (718 aa)
	M4CAK6_BRARP	Uncharacterized protein. (939 aa)
	M4FIK5_BRARP	Uncharacterized protein. (937 aa)
	M4CAY8_BRARP	Uncharacterized protein. (123 aa)
	M4CB66_BRARP	Uncharacterized protein. (1027 aa)
	M4CC75_BRARP	Uncharacterized protein. (137 aa)
	M4CEE1_BRARP	Uncharacterized protein. (158 aa)
	M4CFW2_BRARP	Uncharacterized protein. (490 aa)
	M4CFW4_BRARP	Uncharacterized protein. (1174 aa)
	M4CJJ3_BRARP	DUF155 domain-containing protein. (372 aa)
	M4CLC4_BRARP	LIM zinc-binding domain-containing protein. (501 aa)
	M4CLU2_BRARP	Uncharacterized protein. (124 aa)
	M4CMF5_BRARP	Uncharacterized protein. (1247 aa)
	M4CND5_BRARP	Uncharacterized protein. (110 aa)
	M4CNM0_BRARP	Uncharacterized protein. (155 aa)
	M4CP16_BRARP	Uncharacterized protein. (1174 aa)
	M4CXB3_BRARP	BTB domain-containing protein. (707 aa)
	M4CXK9_BRARP	Uncharacterized protein. (917 aa)
	M4CYV6_BRARP	SET domain-containing protein. (255 aa)
	M4ENS5_BRARP	Uncharacterized protein. (119 aa)
	M4CZE3_BRARP	Uncharacterized protein. (108 aa)
	M4CZF9_BRARP	Uncharacterized protein. (73 aa)
	M4CZV5_BRARP	Uncharacterized protein. (345 aa)
	M4D5F5_BRARP	LIM zinc-binding domain-containing protein. (598 aa)
	M4D614_BRARP	Uncharacterized protein. (138 aa)
	M4D6H8_BRARP	LIM zinc-binding domain-containing protein. (1315 aa)
	M4D6U8_BRARP	Uncharacterized protein. (126 aa)
	M4D9T0_BRARP	Cyclin-dependent kinase inhibitor; Belongs to the CDI family. ICK/KRP subfamily. (199 aa)
	M4DCQ3_BRARP	Uncharacterized protein. (104 aa)
	M4DE76_BRARP	CDT1_C domain-containing protein. (352 aa)
	M4C9H1_BRARP	Uncharacterized protein. (198 aa)
	M4C978_BRARP	WD_REPEATS_REGION domain-containing protein. (470 aa)
	M4C8F1_BRARP	Uncharacterized protein. (140 aa)
	M4C7H4_BRARP	LIM zinc-binding domain-containing protein. (514 aa)
	M4DE78_BRARP	CDT1 domain-containing protein. (460 aa)
	M4DEB4_BRARP	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (304 aa)
	M4DGF9_BRARP	Uncharacterized protein. (85 aa)
	M4DJ36_BRARP	LIM zinc-binding domain-containing protein. (462 aa)
	M4DKY8_BRARP	Uncharacterized protein. (119 aa)
	M4DNJ3_BRARP	Uncharacterized protein. (384 aa)
	M4DP32_BRARP	CDT1 domain-containing protein. (587 aa)
	M4DPD6_BRARP	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
	M4DQ54_BRARP	Uncharacterized protein. (107 aa)
	M4DQW1_BRARP	Uncharacterized protein. (116 aa)
	M4DT15_BRARP	Uncharacterized protein. (438 aa)
	M4DTR3_BRARP	Uncharacterized protein. (110 aa)
	M4F6M1_BRARP	Uncharacterized protein. (630 aa)
	M4F7U8_BRARP	LIM zinc-binding domain-containing protein. (516 aa)
	M4F7U9_BRARP	LIM zinc-binding domain-containing protein. (390 aa)
	M4FA81_BRARP	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (2152 aa)
	M4FB07_BRARP	Uncharacterized protein. (1083 aa)
	M4FB43_BRARP	DUF155 domain-containing protein. (356 aa)
	M4FBA6_BRARP	Uncharacterized protein. (1236 aa)
	M4FBI4_BRARP	Uncharacterized protein. (580 aa)
	M4FC91_BRARP	Uncharacterized protein. (1019 aa)
	M4FDA4_BRARP	Uncharacterized protein. (105 aa)
	M4FDM8_BRARP	Uncharacterized protein. (170 aa)
	M4FFY6_BRARP	Uncharacterized protein. (622 aa)
	M4FGY3_BRARP	Uncharacterized protein. (1007 aa)
	M4FHM5_BRARP	CCHC-type domain-containing protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (288 aa)
	M4FHM9_BRARP	Uncharacterized protein. (592 aa)
	M4DZI2_BRARP	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (532 aa)
	M4E234_BRARP	CDT1 domain-containing protein. (551 aa)
	M4E2I9_BRARP	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (740 aa)
	M4E3N6_BRARP	BTB domain-containing protein. (651 aa)
	M4E560_BRARP	Uncharacterized protein. (141 aa)
	M4E6S0_BRARP	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (192 aa)
	M4E7P8_BRARP	Uncharacterized protein. (459 aa)
	M4E9W7_BRARP	Uncharacterized protein. (106 aa)
	M4EAB7_BRARP	LIM zinc-binding domain-containing protein. (527 aa)
	M4EAK2_BRARP	Methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family. (356 aa)
	M4ECR8_BRARP	Uncharacterized protein. (476 aa)
	M4EDH7_BRARP	Uncharacterized protein. (135 aa)
	M4C799_BRARP	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (312 aa)
	M4EEB7_BRARP	Uncharacterized protein. (110 aa)
	M4EER3_BRARP	SP-RING-type domain-containing protein. (289 aa)
	M4EIK3_BRARP	SET domain-containing protein. (254 aa)
	M4EJ23_BRARP	Uncharacterized protein. (129 aa)
	M4EJB4_BRARP	Uncharacterized protein. (73 aa)
	M4EKT4_BRARP	Uncharacterized protein. (550 aa)
	M4EKV9_BRARP	WD_REPEATS_REGION domain-containing protein. (475 aa)
	M4ELF4_BRARP	Uncharacterized protein. (1009 aa)
	M4EM28_BRARP	Uncharacterized protein. (129 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4C799_BRARP	M4C978_BRARP	M4C799	M4C978	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	WD_REPEATS_REGION domain-containing protein.	0.801
M4C799_BRARP	M4CB66_BRARP	M4C799	M4CB66	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.894
M4C799_BRARP	M4D9T0_BRARP	M4C799	M4D9T0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Cyclin-dependent kinase inhibitor; Belongs to the CDI family. ICK/KRP subfamily.	0.561
M4C799_BRARP	M4DE76_BRARP	M4C799	M4DE76	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	CDT1_C domain-containing protein.	0.704
M4C799_BRARP	M4DE78_BRARP	M4C799	M4DE78	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	CDT1 domain-containing protein.	0.704
M4C799_BRARP	M4DP32_BRARP	M4C799	M4DP32	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	CDT1 domain-containing protein.	0.704
M4C799_BRARP	M4DPD6_BRARP	M4C799	M4DPD6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.587
M4C799_BRARP	M4E234_BRARP	M4C799	M4E234	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	CDT1 domain-containing protein.	0.704
M4C799_BRARP	M4E6S0_BRARP	M4C799	M4E6S0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	0.804
M4C799_BRARP	M4EKV9_BRARP	M4C799	M4EKV9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	WD_REPEATS_REGION domain-containing protein.	0.801
M4C799_BRARP	M4ERZ3_BRARP	M4C799	M4ERZ3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.587
M4C799_BRARP	M4F119_BRARP	M4C799	M4F119	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.894
M4C799_BRARP	M4F1W5_BRARP	M4C799	M4F1W5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	TPR_REGION domain-containing protein.	0.922
M4C799_BRARP	M4FC91_BRARP	M4C799	M4FC91	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.894
M4C799_BRARP	M4FDM8_BRARP	M4C799	M4FDM8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.495
M4C799_BRARP	MCM7	M4C799	M4C9L8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]	0.778
M4C799_BRARP	MCM7-2	M4C799	M4F5E0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]	0.778
M4C7H4_BRARP	M4CFW2_BRARP	M4C7H4	M4CFW2	LIM zinc-binding domain-containing protein.	Uncharacterized protein.	0.414
M4C7H4_BRARP	M4FIK5_BRARP	M4C7H4	M4FIK5	LIM zinc-binding domain-containing protein.	Uncharacterized protein.	0.414
M4C8F1_BRARP	M4DTR3_BRARP	M4C8F1	M4DTR3	Uncharacterized protein.	Uncharacterized protein.	0.456

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