(9 nodes) Protein import into peroxisome matrix, docking network (Brassica rapa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	M4EJH2_BRARP	TPR_REGION domain-containing protein. (730 aa)
	M4FFZ0_BRARP	Uncharacterized protein. (230 aa)
	M4F480_BRARP	Pex14_N domain-containing protein. (488 aa)
	M4F3G3_BRARP	Uncharacterized protein. (118 aa)
	M4ELI9_BRARP	Uncharacterized protein. (289 aa)
	M4E862_BRARP	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (887 aa)
	M4D0X5_BRARP	Pex14_N domain-containing protein. (531 aa)
	M4CF44_BRARP	Uncharacterized protein. (762 aa)
	M4CAM8_BRARP	Uncharacterized protein. (304 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4CAM8_BRARP	M4CF44_BRARP	M4CAM8	M4CF44	Uncharacterized protein.	Uncharacterized protein.	0.459
M4CAM8_BRARP	M4D0X5_BRARP	M4CAM8	M4D0X5	Uncharacterized protein.	Pex14_N domain-containing protein.	0.942
M4CAM8_BRARP	M4E862_BRARP	M4CAM8	M4E862	Uncharacterized protein.	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-.	0.412
M4CAM8_BRARP	M4EJH2_BRARP	M4CAM8	M4EJH2	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.459
M4CAM8_BRARP	M4ELI9_BRARP	M4CAM8	M4ELI9	Uncharacterized protein.	Uncharacterized protein.	0.900
M4CAM8_BRARP	M4F3G3_BRARP	M4CAM8	M4F3G3	Uncharacterized protein.	Uncharacterized protein.	0.420
M4CAM8_BRARP	M4F480_BRARP	M4CAM8	M4F480	Uncharacterized protein.	Pex14_N domain-containing protein.	0.942
M4CAM8_BRARP	M4FFZ0_BRARP	M4CAM8	M4FFZ0	Uncharacterized protein.	Uncharacterized protein.	0.901
M4CF44_BRARP	M4CAM8_BRARP	M4CF44	M4CAM8	Uncharacterized protein.	Uncharacterized protein.	0.459
M4CF44_BRARP	M4D0X5_BRARP	M4CF44	M4D0X5	Uncharacterized protein.	Pex14_N domain-containing protein.	0.983
M4CF44_BRARP	M4E862_BRARP	M4CF44	M4E862	Uncharacterized protein.	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-.	0.667
M4CF44_BRARP	M4ELI9_BRARP	M4CF44	M4ELI9	Uncharacterized protein.	Uncharacterized protein.	0.459
M4CF44_BRARP	M4F480_BRARP	M4CF44	M4F480	Uncharacterized protein.	Pex14_N domain-containing protein.	0.983
M4CF44_BRARP	M4FFZ0_BRARP	M4CF44	M4FFZ0	Uncharacterized protein.	Uncharacterized protein.	0.459
M4D0X5_BRARP	M4CAM8_BRARP	M4D0X5	M4CAM8	Pex14_N domain-containing protein.	Uncharacterized protein.	0.942
M4D0X5_BRARP	M4CF44_BRARP	M4D0X5	M4CF44	Pex14_N domain-containing protein.	Uncharacterized protein.	0.983
M4D0X5_BRARP	M4E862_BRARP	M4D0X5	M4E862	Pex14_N domain-containing protein.	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-.	0.493
M4D0X5_BRARP	M4EJH2_BRARP	M4D0X5	M4EJH2	Pex14_N domain-containing protein.	TPR_REGION domain-containing protein.	0.998
M4D0X5_BRARP	M4ELI9_BRARP	M4D0X5	M4ELI9	Pex14_N domain-containing protein.	Uncharacterized protein.	0.942
M4D0X5_BRARP	M4F3G3_BRARP	M4D0X5	M4F3G3	Pex14_N domain-containing protein.	Uncharacterized protein.	0.983

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