STRINGSTRING
M4D8F5_BRARP M4D8F5_BRARP M4D7N0_BRARP M4D7N0_BRARP M4D466_BRARP M4D466_BRARP M4D3C8_BRARP M4D3C8_BRARP M4D2Y3_BRARP M4D2Y3_BRARP M4D1V1_BRARP M4D1V1_BRARP M4D111_BRARP M4D111_BRARP M4FIA1_BRARP M4FIA1_BRARP M4EYX8_BRARP M4EYX8_BRARP M4EXH3_BRARP M4EXH3_BRARP M4EV52_BRARP M4EV52_BRARP M4EU23_BRARP M4EU23_BRARP M4ETF8_BRARP M4ETF8_BRARP M4ENN3_BRARP M4ENN3_BRARP M4EIW9_BRARP M4EIW9_BRARP M4E7L4_BRARP M4E7L4_BRARP M4E524_BRARP M4E524_BRARP M4E4V8_BRARP M4E4V8_BRARP M4E4S7_BRARP M4E4S7_BRARP M4E421_BRARP M4E421_BRARP M4DSW8_BRARP M4DSW8_BRARP M4DRK1_BRARP M4DRK1_BRARP M4DKW3_BRARP M4DKW3_BRARP M4DGT8_BRARP M4DGT8_BRARP M4DE19_BRARP M4DE19_BRARP EIF6-3 EIF6-3 M4CY91_BRARP M4CY91_BRARP M4CX51_BRARP M4CX51_BRARP M4CWU4_BRARP M4CWU4_BRARP M4CUN6_BRARP M4CUN6_BRARP M4CUE9_BRARP M4CUE9_BRARP EIF6-2 EIF6-2 M4CSH9_BRARP M4CSH9_BRARP M4CRN9_BRARP M4CRN9_BRARP M4CQ17_BRARP M4CQ17_BRARP M4CPX1_BRARP M4CPX1_BRARP EIF6 EIF6 M4CPK8_BRARP M4CPK8_BRARP M4CL06_BRARP M4CL06_BRARP M4CIB6_BRARP M4CIB6_BRARP M4CDN3_BRARP M4CDN3_BRARP M4CCG5_BRARP M4CCG5_BRARP M4CCE7_BRARP M4CCE7_BRARP M4C843_BRARP M4C843_BRARP M4C756_BRARP M4C756_BRARP M4FAF3_BRARP M4FAF3_BRARP M4FEV6_BRARP M4FEV6_BRARP M4FFL5_BRARP M4FFL5_BRARP M4FHF6_BRARP M4FHF6_BRARP M4F4B4_BRARP M4F4B4_BRARP M4F8T8_BRARP M4F8T8_BRARP M4F5G9_BRARP M4F5G9_BRARP M4F527_BRARP M4F527_BRARP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
M4D8F5_BRARP60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
M4D7N0_BRARPRibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (229 aa)
M4D466_BRARPC2H2-type domain-containing protein. (395 aa)
M4D3C8_BRARPRibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (229 aa)
M4D2Y3_BRARPWD_REPEATS_REGION domain-containing protein. (467 aa)
M4D1V1_BRARPUncharacterized protein. (765 aa)
M4D111_BRARPUncharacterized protein. (364 aa)
M4FIA1_BRARPUncharacterized protein. (294 aa)
M4EYX8_BRARPMidasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5408 aa)
M4EXH3_BRARP60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
M4EV52_BRARPUncharacterized protein. (82 aa)
M4EU23_BRARPWD_REPEATS_REGION domain-containing protein. (508 aa)
M4ETF8_BRARPC2H2-type domain-containing protein. (399 aa)
M4ENN3_BRARPUncharacterized protein. (64 aa)
M4EIW9_BRARPUncharacterized protein. (260 aa)
M4E7L4_BRARPRibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (229 aa)
M4E524_BRARPUncharacterized protein. (96 aa)
M4E4V8_BRARPUncharacterized protein. (296 aa)
M4E4S7_BRARPProtein MAK16 homolog; Belongs to the MAK16 family. (286 aa)
M4E421_BRARPRibosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (428 aa)
M4DSW8_BRARPBrix domain-containing protein. (343 aa)
M4DRK1_BRARPPutative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (818 aa)
M4DKW3_BRARPRibosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (318 aa)
M4DGT8_BRARPWD_REPEATS_REGION domain-containing protein. (436 aa)
M4DE19_BRARPUncharacterized protein. (377 aa)
EIF6-3Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (252 aa)
M4CY91_BRARPUncharacterized protein. (260 aa)
M4CX51_BRARPFtsJ domain-containing protein. (227 aa)
M4CWU4_BRARPRibosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (428 aa)
M4CUN6_BRARPProtein MAK16 homolog; Belongs to the MAK16 family. (302 aa)
M4CUE9_BRARPUncharacterized protein. (400 aa)
EIF6-2Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
M4CSH9_BRARPUncharacterized protein. (628 aa)
M4CRN9_BRARPUncharacterized protein. (108 aa)
M4CQ17_BRARPRibosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (428 aa)
M4CPX1_BRARPPescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (592 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (394 aa)
M4CPK8_BRARPUncharacterized protein. (613 aa)
M4CL06_BRARPRibosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. In the N-terminal section; belongs to the PMEI family. (1259 aa)
M4CIB6_BRARPProtein MAK16 homolog; Belongs to the MAK16 family. (305 aa)
M4CDN3_BRARPUncharacterized protein. (517 aa)
M4CCG5_BRARPProtein MAK16 homolog; Belongs to the MAK16 family. (297 aa)
M4CCE7_BRARPUncharacterized protein. (286 aa)
M4C843_BRARPRibosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (738 aa)
M4C756_BRARPRibosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (319 aa)
M4FAF3_BRARP60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
M4FEV6_BRARPUncharacterized protein. (761 aa)
M4FFL5_BRARPNLE domain-containing protein. (120 aa)
M4FHF6_BRARPUncharacterized protein. (76 aa)
M4F4B4_BRARPBrix domain-containing protein. (339 aa)
M4F8T8_BRARPUncharacterized protein. (313 aa)
M4F5G9_BRARPBrix domain-containing protein. (350 aa)
M4F527_BRARPUncharacterized protein. (315 aa)
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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