82 items (Brassica rapa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M4CJT7_BRARP	SANT domain-containing protein. (432 aa)
	M4C8C8_BRARP	Uncharacterized protein. (840 aa)
	M4CAI2_BRARP	PAPA-1 domain-containing protein. (348 aa)
	M4CDX5_BRARP	RuvB-like helicase; Belongs to the RuvB family. (458 aa)
	M4CEL8_BRARP	HIT-type domain-containing protein. (171 aa)
	M4CEQ4_BRARP	Uncharacterized protein. (194 aa)
	M4CFS4_BRARP	Uncharacterized protein. (723 aa)
	M4CG46_BRARP	FHA domain-containing protein. (556 aa)
	M4CIT9_BRARP	Ubiquitin carboxyl-terminal hydrolase. (329 aa)
	M4CJ29_BRARP	DDT domain-containing protein. (616 aa)
	M4CJQ7_BRARP	Uncharacterized protein. (514 aa)
	M4CP74_BRARP	Uncharacterized protein. (714 aa)
	M4CPL9_BRARP	Uncharacterized protein. (1476 aa)
	M4CPT6_BRARP	Uncharacterized protein. (218 aa)
	M4CPV3_BRARP	SWIB domain-containing protein. (503 aa)
	M4CQY0_BRARP	RuvB-like helicase; Belongs to the RuvB family. (458 aa)
	M4CQZ4_BRARP	Uncharacterized protein. (1532 aa)
	M4CRC5_BRARP	HIT-type domain-containing protein. (171 aa)
	M4CRF2_BRARP	Uncharacterized protein. (164 aa)
	M4CSX6_BRARP	Uncharacterized protein. (1496 aa)
	M4CX44_BRARP	Uncharacterized protein. (892 aa)
	M4CXE3_BRARP	Uncharacterized protein. (1727 aa)
	M4CYR0_BRARP	Uncharacterized protein. (714 aa)
	M4D054_BRARP	Uncharacterized protein. (421 aa)
	M4D316_BRARP	Uncharacterized protein. (1570 aa)
	M4D400_BRARP	Uncharacterized protein. (207 aa)
	M4D6A7_BRARP	CBFD_NFYB_HMF domain-containing protein. (221 aa)
	M4D6Y3_BRARP	Bromo domain-containing protein. (546 aa)
	M4D7Y9_BRARP	Uncharacterized protein. (109 aa)
	M4D8P2_BRARP	Uncharacterized protein. (72 aa)
	M4D9Z6_BRARP	Uncharacterized protein. (101 aa)
	M4DDR4_BRARP	Uncharacterized protein. (1514 aa)
	M4DE99_BRARP	FHA domain-containing protein. (714 aa)
	M4DGX9_BRARP	Uncharacterized protein. (543 aa)
	M4DGY9_BRARP	SANT domain-containing protein. (262 aa)
	M4DH59_BRARP	FHA domain-containing protein. (543 aa)
	M4DIT2_BRARP	Uncharacterized protein. (793 aa)
	M4DIX9_BRARP	Bromo domain-containing protein. (629 aa)
	M4DJ54_BRARP	DDT domain-containing protein. (737 aa)
	M4DN56_BRARP	Uncharacterized protein. (617 aa)
	M4DUJ2_BRARP	RuvB-like helicase; Belongs to the RuvB family. (458 aa)
	M4DUM0_BRARP	Uncharacterized protein. (1565 aa)
	M4DV61_BRARP	Uncharacterized protein. (204 aa)
	M4DXW1_BRARP	GLTSCR1 domain-containing protein. (279 aa)
	M4DXZ5_BRARP	SANT domain-containing protein. (406 aa)
	M4DZB7_BRARP	Uncharacterized protein. (459 aa)
	M4E0C6_BRARP	Uncharacterized protein. (236 aa)
	M4E3M3_BRARP	Uncharacterized protein. (1537 aa)
	M4E5K4_BRARP	Uncharacterized protein. (203 aa)
	M4E6M9_BRARP	RuvB-like helicase; Belongs to the RuvB family. (466 aa)
	M4E6T1_BRARP	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3858 aa)
	M4E8G3_BRARP	Uncharacterized protein. (261 aa)
	M4EA95_BRARP	Uncharacterized protein. (745 aa)
	M4EAM8_BRARP	Bromo domain-containing protein. (645 aa)
	M4EK69_BRARP	Uncharacterized protein. (376 aa)
	M4EMD1_BRARP	DDT domain-containing protein. (485 aa)
	M4EPN4_BRARP	Uncharacterized protein. (902 aa)
	M4EPU7_BRARP	Uncharacterized protein; Belongs to the actin family. (222 aa)
	M4EQI6_BRARP	Uncharacterized protein. (760 aa)
	M4ERA4_BRARP	Uncharacterized protein. (65 aa)
	M4EVK3_BRARP	Uncharacterized protein. (130 aa)
	M4EVS5_BRARP	Uncharacterized protein. (1662 aa)
	M4EY35_BRARP	Uncharacterized protein. (1640 aa)
	M4EYE2_BRARP	Uncharacterized protein. (148 aa)
	M4EYK2_BRARP	BAF250_C domain-containing protein. (458 aa)
	M4EYW7_BRARP	DDT domain-containing protein. (522 aa)
	M4F0Y2_BRARP	Uncharacterized protein. (2019 aa)
	M4F113_BRARP	Uncharacterized protein; Belongs to the actin family. (412 aa)
	M4F3C8_BRARP	FHA domain-containing protein. (195 aa)
	ZCHP2	Uncharacterized protein. (382 aa)
	M4F4I2_BRARP	Uncharacterized protein; Belongs to the actin family. (565 aa)
	M4F835_BRARP	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3775 aa)
	M4F938_BRARP	Uncharacterized protein. (1536 aa)
	M4F9S1_BRARP	RuvB-like helicase. (93 aa)
	M4FAP6_BRARP	PAPA-1 domain-containing protein. (405 aa)
	M4FB07_BRARP	Uncharacterized protein. (1083 aa)
	M4FCT4_BRARP	Uncharacterized protein. (104 aa)
	M4FDE6_BRARP	Uncharacterized protein. (2036 aa)
	M4FGQ6_BRARP	PAPA-1 domain-containing protein. (368 aa)
	M4FHE0_BRARP	Uncharacterized protein. (2143 aa)
	M4FIA9_BRARP	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (932 aa)
	M4FJ78_BRARP	Uncharacterized protein. (131 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4C8C8_BRARP	M4CPV3_BRARP	M4C8C8	M4CPV3	Uncharacterized protein.	SWIB domain-containing protein.	0.980
M4C8C8_BRARP	M4DGY9_BRARP	M4C8C8	M4DGY9	Uncharacterized protein.	SANT domain-containing protein.	0.480
M4C8C8_BRARP	M4DZB7_BRARP	M4C8C8	M4DZB7	Uncharacterized protein.	Uncharacterized protein.	0.480
M4C8C8_BRARP	M4E0C6_BRARP	M4C8C8	M4E0C6	Uncharacterized protein.	Uncharacterized protein.	0.972
M4C8C8_BRARP	M4EPU7_BRARP	M4C8C8	M4EPU7	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.471
M4C8C8_BRARP	M4EYE2_BRARP	M4C8C8	M4EYE2	Uncharacterized protein.	Uncharacterized protein.	0.979
M4C8C8_BRARP	M4EYK2_BRARP	M4C8C8	M4EYK2	Uncharacterized protein.	BAF250_C domain-containing protein.	0.971
M4C8C8_BRARP	M4F4I2_BRARP	M4C8C8	M4F4I2	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.515
M4CAI2_BRARP	M4CDX5_BRARP	M4CAI2	M4CDX5	PAPA-1 domain-containing protein.	RuvB-like helicase; Belongs to the RuvB family.	0.540
M4CAI2_BRARP	M4CEL8_BRARP	M4CAI2	M4CEL8	PAPA-1 domain-containing protein.	HIT-type domain-containing protein.	0.540
M4CAI2_BRARP	M4CJT7_BRARP	M4CAI2	M4CJT7	PAPA-1 domain-containing protein.	SANT domain-containing protein.	0.540
M4CAI2_BRARP	M4CQY0_BRARP	M4CAI2	M4CQY0	PAPA-1 domain-containing protein.	RuvB-like helicase; Belongs to the RuvB family.	0.540
M4CAI2_BRARP	M4CRC5_BRARP	M4CAI2	M4CRC5	PAPA-1 domain-containing protein.	HIT-type domain-containing protein.	0.540
M4CAI2_BRARP	M4CSX6_BRARP	M4CAI2	M4CSX6	PAPA-1 domain-containing protein.	Uncharacterized protein.	0.540
M4CAI2_BRARP	M4DDR4_BRARP	M4CAI2	M4DDR4	PAPA-1 domain-containing protein.	Uncharacterized protein.	0.540
M4CAI2_BRARP	M4DUJ2_BRARP	M4CAI2	M4DUJ2	PAPA-1 domain-containing protein.	RuvB-like helicase; Belongs to the RuvB family.	0.540
M4CAI2_BRARP	M4DXZ5_BRARP	M4CAI2	M4DXZ5	PAPA-1 domain-containing protein.	SANT domain-containing protein.	0.540
M4CAI2_BRARP	M4E6M9_BRARP	M4CAI2	M4E6M9	PAPA-1 domain-containing protein.	RuvB-like helicase; Belongs to the RuvB family.	0.540
M4CAI2_BRARP	M4EPU7_BRARP	M4CAI2	M4EPU7	PAPA-1 domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.540
M4CAI2_BRARP	M4EVK3_BRARP	M4CAI2	M4EVK3	PAPA-1 domain-containing protein.	Uncharacterized protein.	0.540

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