STRINGSTRING
M4CH04_BRARP M4CH04_BRARP M4CH03_BRARP M4CH03_BRARP M4CHZ3_BRARP M4CHZ3_BRARP M4CS22_BRARP M4CS22_BRARP M4CTW9_BRARP M4CTW9_BRARP M4CW47_BRARP M4CW47_BRARP M4D162_BRARP M4D162_BRARP M4D447_BRARP M4D447_BRARP M4DHI2_BRARP M4DHI2_BRARP M4DLX9_BRARP M4DLX9_BRARP M4E1E9_BRARP M4E1E9_BRARP M4E5G4_BRARP M4E5G4_BRARP M4ED46_BRARP M4ED46_BRARP M4EHI3_BRARP M4EHI3_BRARP M4EHP8_BRARP M4EHP8_BRARP M4EK80_BRARP M4EK80_BRARP M4EVA2_BRARP M4EVA2_BRARP M4FA35_BRARP M4FA35_BRARP M4FA36_BRARP M4FA36_BRARP M4FDR1_BRARP M4FDR1_BRARP M4FI82_BRARP M4FI82_BRARP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
M4CH04_BRARPAA_TRNA_LIGASE_II domain-containing protein. (500 aa)
M4CH03_BRARPAA_TRNA_LIGASE_II domain-containing protein. (461 aa)
M4CHZ3_BRARPUncharacterized protein. (384 aa)
M4CS22_BRARPtRNA-synt_2 domain-containing protein. (176 aa)
M4CTW9_BRARPAA_TRNA_LIGASE_II domain-containing protein. (513 aa)
M4CW47_BRARPUncharacterized protein. (154 aa)
M4D162_BRARPUncharacterized protein. (153 aa)
M4D447_BRARPAA_TRNA_LIGASE_II domain-containing protein. (549 aa)
M4DHI2_BRARPUncharacterized protein. (365 aa)
M4DLX9_BRARPProRS-C_1 domain-containing protein. (145 aa)
M4E1E9_BRARPAA_TRNA_LIGASE_II domain-containing protein. (542 aa)
M4E5G4_BRARPAA_TRNA_LIGASE_II domain-containing protein. (552 aa)
M4ED46_BRARPUncharacterized protein. (2164 aa)
M4EHI3_BRARPAA_TRNA_LIGASE_II domain-containing protein. (538 aa)
M4EHP8_BRARPAA_TRNA_LIGASE_II domain-containing protein. (408 aa)
M4EK80_BRARPProRS-C_1 domain-containing protein. (218 aa)
M4EVA2_BRARPtRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (792 aa)
M4FA35_BRARPUncharacterized protein. (147 aa)
M4FA36_BRARPUncharacterized protein. (120 aa)
M4FDR1_BRARPProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (992 aa)
M4FI82_BRARPtRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (802 aa)
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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