(115 nodes) Cytosolic small ribosomal subunit network (Brassica rapa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M4E9N6_BRARP	S10_plectin domain-containing protein. (179 aa)
	M4CR48_BRARP	RRM domain-containing protein; Belongs to the universal ribosomal protein uS8 family. (247 aa)
	M4CQR2_BRARP	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (289 aa)
	M4CQG5_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	M4CQ51_BRARP	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (190 aa)
	M4CQ00_BRARP	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (197 aa)
	M4CPB8_BRARP	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	M4CP86_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (118 aa)
	M4CNU9_BRARP	Uncharacterized protein. (137 aa)
	M4CNN2_BRARP	Uncharacterized protein. (135 aa)
	M4CNF7_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (136 aa)
	M4CN47_BRARP	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (144 aa)
	M4CLX2_BRARP	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (207 aa)
	M4CL15_BRARP	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	M4CKB9_BRARP	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (285 aa)
	M4CIF1_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (142 aa)
	M4CGU4_BRARP	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	M4CGA4_BRARP	NAC domain-containing protein. (284 aa)
	M4CG25_BRARP	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (82 aa)
	M4CFY6_BRARP	S10_plectin domain-containing protein. (179 aa)
	M4CFK1_BRARP	Uncharacterized protein. (113 aa)
	M4CE93_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	M4CE72_BRARP	Uncharacterized protein. (878 aa)
	M4CDK9_BRARP	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (227 aa)
	M4CA98_BRARP	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (262 aa)
	M4CA23_BRARP	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (191 aa)
	M4C9Z9_BRARP	Uncharacterized protein. (143 aa)
	M4C870_BRARP	40S ribosomal protein S27. (84 aa)
	M4C7R4_BRARP	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (282 aa)
	M4C7L5_BRARP	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (129 aa)
	M4CSP6_BRARP	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (134 aa)
	M4CWP6_BRARP	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (190 aa)
	M4CXU2_BRARP	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	M4CYY4_BRARP	Uncharacterized protein. (136 aa)
	M4CZ60_BRARP	Uncharacterized protein. (64 aa)
	M4CZB0_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (136 aa)
	M4D0E9_BRARP	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (82 aa)
	M4D178_BRARP	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (250 aa)
	M4D1U8_BRARP	S10_plectin domain-containing protein. (181 aa)
	M4D3Q4_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (165 aa)
	M4D487_BRARP	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (250 aa)
	M4D4S2_BRARP	Uncharacterized protein. (56 aa)
	M4D4Z4_BRARP	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (262 aa)
	M4D5W4_BRARP	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (108 aa)
	M4D920_BRARP	Uncharacterized protein. (143 aa)
	M4DBQ5_BRARP	S10_plectin domain-containing protein. (180 aa)
	M4DDX8_BRARP	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (153 aa)
	M4DFM6_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (152 aa)
	M4DIL9_BRARP	Ribosomal_S27 domain-containing protein. (84 aa)
	M4DK84_BRARP	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (285 aa)
	M4DL18_BRARP	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (207 aa)
	M4DMD6_BRARP	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (261 aa)
	M4DNY8_BRARP	KH type-2 domain-containing protein. (249 aa)
	M4DNZ3_BRARP	Ribosomal_S3_C domain-containing protein. (123 aa)
	M4DQ96_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	M4DRK0_BRARP	S10_plectin domain-containing protein. (181 aa)
	M4DUT7_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (160 aa)
	M4DVN5_BRARP	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (82 aa)
	M4DW28_BRARP	40S ribosomal protein S27. (90 aa)
	M4DY35_BRARP	Uncharacterized protein. (351 aa)
	M4DY82_BRARP	Uncharacterized protein. (143 aa)
	M4DYX5_BRARP	KH type-2 domain-containing protein. (249 aa)
	M4DYX7_BRARP	KH type-2 domain-containing protein. (249 aa)
	M4DZ26_BRARP	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (144 aa)
	M4DZY9_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (115 aa)
	M4E1A6_BRARP	Ribosomal_S10 domain-containing protein. (124 aa)
	M4E251_BRARP	KH type-2 domain-containing protein. (249 aa)
	M4E259_BRARP	KH type-2 domain-containing protein. (249 aa)
	M4E278_BRARP	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (146 aa)
	M4E2W2_BRARP	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (387 aa)
	M4E408_BRARP	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (197 aa)
	M4E4V0_BRARP	Uncharacterized protein. (88 aa)
	M4E8K2_BRARP	Uncharacterized protein. (125 aa)
	M4EC15_BRARP	Uncharacterized protein. (90 aa)
	M4ED79_BRARP	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (145 aa)
	M4EGE3_BRARP	Uncharacterized protein. (64 aa)
	M4EGW3_BRARP	Uncharacterized protein. (218 aa)
	M4EHJ8_BRARP	Ribosomal_S10 domain-containing protein. (123 aa)
	M4EI83_BRARP	Uncharacterized protein. (649 aa)
	M4EIH5_BRARP	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	M4EJ13_BRARP	Uncharacterized protein. (179 aa)
	M4EJ49_BRARP	Uncharacterized protein. (64 aa)
	M4EJ90_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (142 aa)
	M4EJZ5_BRARP	S10_plectin domain-containing protein. (177 aa)
	M4EKE6_BRARP	Ribosomal_S10 domain-containing protein. (52 aa)
	M4EKE8_BRARP	Ribosomal_S10 domain-containing protein. (102 aa)
	M4EKL4_BRARP	Uncharacterized protein. (123 aa)
	M4ENC2_BRARP	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (108 aa)
	M4EQM5_BRARP	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (80 aa)
	M4EQX9_BRARP	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (108 aa)
	M4ES12_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	M4EVN4_BRARP	Uncharacterized protein. (206 aa)
	M4EZ34_BRARP	Uncharacterized protein. (258 aa)
	M4F054_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (152 aa)
	M4F0P8_BRARP	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (261 aa)
	M4F1N9_BRARP	Uncharacterized protein. (66 aa)
	M4F2Y9_BRARP	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (280 aa)
	M4F3H8_BRARP	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (62 aa)
	M4F462_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (158 aa)
	M4F495_BRARP	Ribosomal_S10 domain-containing protein. (122 aa)
	M4F4D9_BRARP	Uncharacterized protein. (143 aa)
	M4F532_BRARP	40S ribosomal protein S27. (84 aa)
	M4F6J8_BRARP	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (143 aa)
	M4F7B0_BRARP	Uncharacterized protein. (361 aa)
	M4F9X0_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (187 aa)
	M4FAW1_BRARP	Ribosomal_S10 domain-containing protein. (133 aa)
	M4FD43_BRARP	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (129 aa)
	M4FD47_BRARP	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (97 aa)
	M4FDH9_BRARP	Uncharacterized protein. (143 aa)
	M4FDL1_BRARP	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (208 aa)
	M4FG88_BRARP	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)
	M4FG92_BRARP	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (261 aa)
	M4FH31_BRARP	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (262 aa)
	M4FH37_BRARP	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)
	M4FIC4_BRARP	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (197 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4C7L5_BRARP	M4C7R4_BRARP	M4C7L5	M4C7R4	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.983
M4C7L5_BRARP	M4C870_BRARP	M4C7L5	M4C870	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	40S ribosomal protein S27.	0.946
M4C7L5_BRARP	M4C9Z9_BRARP	M4C7L5	M4C9Z9	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Uncharacterized protein.	0.986
M4C7L5_BRARP	M4CA23_BRARP	M4C7L5	M4CA23	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.989
M4C7L5_BRARP	M4CA98_BRARP	M4C7L5	M4CA98	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.973
M4C7L5_BRARP	M4CDK9_BRARP	M4C7L5	M4CDK9	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.989
M4C7L5_BRARP	M4CE72_BRARP	M4C7L5	M4CE72	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Uncharacterized protein.	0.965
M4C7L5_BRARP	M4CE93_BRARP	M4C7L5	M4CE93	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	0.976
M4C7L5_BRARP	M4CFK1_BRARP	M4C7L5	M4CFK1	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Uncharacterized protein.	0.976
M4C7L5_BRARP	M4CFY6_BRARP	M4C7L5	M4CFY6	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	S10_plectin domain-containing protein.	0.983
M4C7L5_BRARP	M4CG25_BRARP	M4C7L5	M4CG25	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.989
M4C7L5_BRARP	M4CGA4_BRARP	M4C7L5	M4CGA4	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	NAC domain-containing protein.	0.543
M4C7L5_BRARP	M4CGU4_BRARP	M4C7L5	M4CGU4	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.997
M4C7L5_BRARP	M4CIF1_BRARP	M4C7L5	M4CIF1	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.983
M4C7L5_BRARP	M4CKB9_BRARP	M4C7L5	M4CKB9	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.983
M4C7L5_BRARP	M4CL15_BRARP	M4C7L5	M4CL15	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.997
M4C7L5_BRARP	M4CLX2_BRARP	M4C7L5	M4CLX2	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	0.982
M4C7L5_BRARP	M4CN47_BRARP	M4C7L5	M4CN47	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.987
M4C7L5_BRARP	M4CNF7_BRARP	M4C7L5	M4CNF7	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.983
M4C7L5_BRARP	M4CNN2_BRARP	M4C7L5	M4CNN2	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Uncharacterized protein.	0.976

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