(53 nodes) Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid network (Brassica rapa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M4CFI6_BRARP	Uncharacterized protein; Belongs to the terpene synthase family. (386 aa)
	M4C8P0_BRARP	Uncharacterized protein. (595 aa)
	M4C949_BRARP	Uncharacterized protein; Belongs to the terpene synthase family. (509 aa)
	M4C9I5_BRARP	Uncharacterized protein; Belongs to the terpene synthase family. (898 aa)
	M4CBH5_BRARP	Uncharacterized protein. (608 aa)
	M4CBH7_BRARP	Uncharacterized protein. (604 aa)
	M4CD84_BRARP	Uncharacterized protein. (556 aa)
	M4CET2_BRARP	Uncharacterized protein. (589 aa)
	M4CHE7_BRARP	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (767 aa)
	M4CLE4_BRARP	Uncharacterized protein. (328 aa)
	M4CPK6_BRARP	Uncharacterized protein. (100 aa)
	M4CXG0_BRARP	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (313 aa)
	M4CZS0_BRARP	Uncharacterized protein; Belongs to the terpene synthase family. (569 aa)
	M4D7Q3_BRARP	Uncharacterized protein. (475 aa)
	M4D7Q5_BRARP	Terpene_synth domain-containing protein. (247 aa)
	M4D8Z5_BRARP	Uncharacterized protein. (599 aa)
	M4D9K7_BRARP	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (767 aa)
	M4DEN0_BRARP	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (844 aa)
	M4DWM7_BRARP	Uncharacterized protein. (405 aa)
	M4DWM8_BRARP	Terpene_synth domain-containing protein. (132 aa)
	M4DWQ7_BRARP	Uncharacterized protein; Belongs to the terpene synthase family. (610 aa)
	M4DX36_BRARP	Uncharacterized protein. (546 aa)
	M4DYG4_BRARP	Uncharacterized protein. (602 aa)
	M4DYG7_BRARP	Uncharacterized protein. (559 aa)
	M4DYG8_BRARP	Uncharacterized protein. (603 aa)
	M4DYH0_BRARP	Uncharacterized protein. (508 aa)
	M4E8Q7_BRARP	Uncharacterized protein. (560 aa)
	M4E8Q8_BRARP	Uncharacterized protein. (1062 aa)
	M4E9Y6_BRARP	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (445 aa)
	M4EB79_BRARP	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (757 aa)
	M4EE68_BRARP	Uncharacterized protein; Belongs to the terpene synthase family. (333 aa)
	M4EE87_BRARP	Uncharacterized protein; Belongs to the terpene synthase family. (749 aa)
	M4EE88_BRARP	Uncharacterized protein. (150 aa)
	M4EFP7_BRARP	Uncharacterized protein; Belongs to the terpene synthase family. (288 aa)
	M4EGL7_BRARP	Uncharacterized protein. (601 aa)
	M4EHI6_BRARP	Uncharacterized protein. (557 aa)
	M4ENG5_BRARP	Uncharacterized protein. (326 aa)
	M4ETQ3_BRARP	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (760 aa)
	M4F1Y1_BRARP	Protein kinase domain-containing protein. (1230 aa)
	M4F1Y2_BRARP	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (765 aa)
	M4F223_BRARP	Uncharacterized protein. (780 aa)
	M4F409_BRARP	Uncharacterized protein; Belongs to the terpene cyclase/mutase family. (585 aa)
	M4F410_BRARP	Uncharacterized protein. (140 aa)
	M4F4C7_BRARP	Uncharacterized protein; Belongs to the terpene synthase family. (568 aa)
	M4F583_BRARP	Uncharacterized protein; Belongs to the terpene synthase family. (807 aa)
	M4FBN8_BRARP	Uncharacterized protein; Belongs to the terpene synthase family. (537 aa)
	M4FBV3_BRARP	Uncharacterized protein; Belongs to the terpene synthase family. (777 aa)
	M4FDR7_BRARP	Uncharacterized protein; Belongs to the terpene synthase family. (730 aa)
	M4FEJ8_BRARP	Ig-like domain-containing protein; Belongs to the terpene synthase family. (557 aa)
	M4FFQ5_BRARP	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (727 aa)
	M4FGH7_BRARP	Uncharacterized protein. (81 aa)
	M4FHK4_BRARP	Uncharacterized protein. (545 aa)
	M4FIJ1_BRARP	Uncharacterized protein. (545 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4C8P0_BRARP	M4C949_BRARP	M4C8P0	M4C949	Uncharacterized protein.	Uncharacterized protein; Belongs to the terpene synthase family.	0.901
M4C8P0_BRARP	M4E8Q7_BRARP	M4C8P0	M4E8Q7	Uncharacterized protein.	Uncharacterized protein.	0.901
M4C949_BRARP	M4C8P0_BRARP	M4C949	M4C8P0	Uncharacterized protein; Belongs to the terpene synthase family.	Uncharacterized protein.	0.901
M4C949_BRARP	M4E8Q7_BRARP	M4C949	M4E8Q7	Uncharacterized protein; Belongs to the terpene synthase family.	Uncharacterized protein.	0.902
M4C9I5_BRARP	M4CHE7_BRARP	M4C9I5	M4CHE7	Uncharacterized protein; Belongs to the terpene synthase family.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.564
M4C9I5_BRARP	M4D9K7_BRARP	M4C9I5	M4D9K7	Uncharacterized protein; Belongs to the terpene synthase family.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.564
M4C9I5_BRARP	M4DEN0_BRARP	M4C9I5	M4DEN0	Uncharacterized protein; Belongs to the terpene synthase family.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.564
M4C9I5_BRARP	M4E9Y6_BRARP	M4C9I5	M4E9Y6	Uncharacterized protein; Belongs to the terpene synthase family.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.449
M4C9I5_BRARP	M4EB79_BRARP	M4C9I5	M4EB79	Uncharacterized protein; Belongs to the terpene synthase family.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.564
M4C9I5_BRARP	M4ENG5_BRARP	M4C9I5	M4ENG5	Uncharacterized protein; Belongs to the terpene synthase family.	Uncharacterized protein.	0.449
M4C9I5_BRARP	M4ETQ3_BRARP	M4C9I5	M4ETQ3	Uncharacterized protein; Belongs to the terpene synthase family.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.564
M4C9I5_BRARP	M4F1Y2_BRARP	M4C9I5	M4F1Y2	Uncharacterized protein; Belongs to the terpene synthase family.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.564
M4C9I5_BRARP	M4F409_BRARP	M4C9I5	M4F409	Uncharacterized protein; Belongs to the terpene synthase family.	Uncharacterized protein; Belongs to the terpene cyclase/mutase family.	0.564
M4C9I5_BRARP	M4F410_BRARP	M4C9I5	M4F410	Uncharacterized protein; Belongs to the terpene synthase family.	Uncharacterized protein.	0.564
M4C9I5_BRARP	M4FFQ5_BRARP	M4C9I5	M4FFQ5	Uncharacterized protein; Belongs to the terpene synthase family.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.564
M4CD84_BRARP	M4CFI6_BRARP	M4CD84	M4CFI6	Uncharacterized protein.	Uncharacterized protein; Belongs to the terpene synthase family.	0.904
M4CD84_BRARP	M4DYG4_BRARP	M4CD84	M4DYG4	Uncharacterized protein.	Uncharacterized protein.	0.905
M4CD84_BRARP	M4E9Y6_BRARP	M4CD84	M4E9Y6	Uncharacterized protein.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.800
M4CD84_BRARP	M4EHI6_BRARP	M4CD84	M4EHI6	Uncharacterized protein.	Uncharacterized protein.	0.901
M4CD84_BRARP	M4FEJ8_BRARP	M4CD84	M4FEJ8	Uncharacterized protein.	Ig-like domain-containing protein; Belongs to the terpene synthase family.	0.901

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