STRINGSTRING
M4E7K4_BRARP M4E7K4_BRARP M4ECA1_BRARP M4ECA1_BRARP M4F676_BRARP M4F676_BRARP M4F7T3_BRARP M4F7T3_BRARP M4DVI5_BRARP M4DVI5_BRARP M4DB56_BRARP M4DB56_BRARP M4D6K2_BRARP M4D6K2_BRARP M4D238_BRARP M4D238_BRARP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
M4E7K4_BRARPUncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (727 aa)
M4ECA1_BRARPUncharacterized protein. (1319 aa)
M4F676_BRARPUncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (721 aa)
M4F7T3_BRARPRibosomal_TL5_C domain-containing protein. (200 aa)
M4DVI5_BRARPUncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (721 aa)
M4DB56_BRARPRibosomal_TL5_C domain-containing protein. (268 aa)
M4D6K2_BRARPRibosomal_TL5_C domain-containing protein. (249 aa)
M4D238_BRARPRibosomal_TL5_C domain-containing protein. (271 aa)
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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