STRINGSTRING
M4CKB9_BRARP M4CKB9_BRARP M4CZK8_BRARP M4CZK8_BRARP M4CZ38_BRARP M4CZ38_BRARP M4CX07_BRARP M4CX07_BRARP M4CHU3_BRARP M4CHU3_BRARP M4EXK6_BRARP M4EXK6_BRARP M4EXJ4_BRARP M4EXJ4_BRARP M4EPC2_BRARP M4EPC2_BRARP M4EM41_BRARP M4EM41_BRARP M4EM08_BRARP M4EM08_BRARP M4ELC1_BRARP M4ELC1_BRARP M4EJ31_BRARP M4EJ31_BRARP M4EE11_BRARP M4EE11_BRARP M4E8K2_BRARP M4E8K2_BRARP M4E862_BRARP M4E862_BRARP M4D2S9_BRARP M4D2S9_BRARP M4E7P2_BRARP M4E7P2_BRARP M4DZD2_BRARP M4DZD2_BRARP M4DVP5_BRARP M4DVP5_BRARP M4DVL8_BRARP M4DVL8_BRARP M4DVJ8_BRARP M4DVJ8_BRARP M4DQU6_BRARP M4DQU6_BRARP M4D3L7_BRARP M4D3L7_BRARP M4D6D1_BRARP M4D6D1_BRARP M4DEA7_BRARP M4DEA7_BRARP M4DHA1_BRARP M4DHA1_BRARP M4DK84_BRARP M4DK84_BRARP M4DL98_BRARP M4DL98_BRARP M4DMI3_BRARP M4DMI3_BRARP M4DNC2_BRARP M4DNC2_BRARP M4DPV8_BRARP M4DPV8_BRARP M4DQU3_BRARP M4DQU3_BRARP M4CF67_BRARP M4CF67_BRARP M4CD75_BRARP M4CD75_BRARP M4CCW6_BRARP M4CCW6_BRARP M4CAH5_BRARP M4CAH5_BRARP M4CA69_BRARP M4CA69_BRARP M4C8Z6_BRARP M4C8Z6_BRARP M4C8U2_BRARP M4C8U2_BRARP M4C7R4_BRARP M4C7R4_BRARP M4D2S8_BRARP M4D2S8_BRARP M4CWB5_BRARP M4CWB5_BRARP M4CS67_BRARP M4CS67_BRARP M4EYK3_BRARP M4EYK3_BRARP M4F2Y9_BRARP M4F2Y9_BRARP M4F369_BRARP M4F369_BRARP TOP6B TOP6B M4F6C1_BRARP M4F6C1_BRARP M4F867_BRARP M4F867_BRARP M4FGB7_BRARP M4FGB7_BRARP M4FGH9_BRARP M4FGH9_BRARP M4FGM6_BRARP M4FGM6_BRARP M4FGP9_BRARP M4FGP9_BRARP M4FHE3_BRARP M4FHE3_BRARP M4FHE4_BRARP M4FHE4_BRARP M4CQG5_BRARP M4CQG5_BRARP M4CNK7_BRARP M4CNK7_BRARP M4CNK6_BRARP M4CNK6_BRARP M4CKZ8_BRARP M4CKZ8_BRARP M4D0C6_BRARP M4D0C6_BRARP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
M4CKB9_BRARPS5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (285 aa)
M4CZK8_BRARPUncharacterized protein. (373 aa)
M4CZ38_BRARPDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (512 aa)
M4CX07_BRARPGHMP_kinases_N domain-containing protein. (163 aa)
M4CHU3_BRARPUncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (145 aa)
M4EXK6_BRARPTr-type G domain-containing protein. (910 aa)
M4EXJ4_BRARPUncharacterized protein. (889 aa)
M4EPC2_BRARPTr-type G domain-containing protein. (987 aa)
M4EM41_BRARPUncharacterized protein. (385 aa)
M4EM08_BRARPDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner. (998 aa)
M4ELC1_BRARPUncharacterized protein. (496 aa)
M4EJ31_BRARPDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner. (997 aa)
M4EE11_BRARPElongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (775 aa)
M4E8K2_BRARPUncharacterized protein. (125 aa)
M4E862_BRARPLon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256|PROSITE-. (887 aa)
M4D2S9_BRARPTr-type G domain-containing protein. (843 aa)
M4E7P2_BRARPTr-type G domain-containing protein. (984 aa)
M4DZD2_BRARPS5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (302 aa)
M4DVP5_BRARPMevalonate kinase. (381 aa)
M4DVL8_BRARPLon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (1097 aa)
M4DVJ8_BRARPUncharacterized protein. (945 aa)
M4DQU6_BRARPLon protease homolog; Belongs to the peptidase S16 family. (964 aa)
M4D3L7_BRARPDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1412 aa)
M4D6D1_BRARPGHMP_kinases_N domain-containing protein. (326 aa)
M4DEA7_BRARPDiphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family. (419 aa)
M4DHA1_BRARPUncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (211 aa)
M4DK84_BRARPS5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (285 aa)
M4DL98_BRARPTr-type G domain-containing protein. (878 aa)
M4DMI3_BRARPUncharacterized protein. (1211 aa)
M4DNC2_BRARPUncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (406 aa)
M4DPV8_BRARPCS domain-containing protein. (1123 aa)
M4DQU3_BRARPLon protease homolog; Belongs to the peptidase S16 family. (846 aa)
M4CF67_BRARPUncharacterized protein. (972 aa)
M4CD75_BRARPMethyltransf_11 domain-containing protein; Belongs to the universal ribosomal protein uS9 family. (383 aa)
M4CCW6_BRARPUncharacterized protein. (370 aa)
M4CAH5_BRARPUncharacterized protein. (540 aa)
M4CA69_BRARPUncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (146 aa)
M4C8Z6_BRARPDNA_mis_repair domain-containing protein. (749 aa)
M4C8U2_BRARPRECA_2 domain-containing protein. (402 aa)
M4C7R4_BRARPS5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (282 aa)
M4D2S8_BRARPUncharacterized protein. (552 aa)
M4CWB5_BRARPS5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (500 aa)
M4CS67_BRARPDiphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family. (419 aa)
M4EYK3_BRARPEFG_C domain-containing protein. (481 aa)
M4F2Y9_BRARPS5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (280 aa)
M4F369_BRARPUncharacterized protein. (502 aa)
TOP6BDNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family. (693 aa)
M4F6C1_BRARPMevalonate kinase. (382 aa)
M4F867_BRARPUncharacterized protein. (370 aa)
M4FGB7_BRARPUncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (146 aa)
M4FGH9_BRARPUncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (146 aa)
M4FGM6_BRARPLon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. ECO:0000256|PROSITE-. (895 aa)
M4FGP9_BRARPUncharacterized protein. (496 aa)
M4FHE3_BRARPLon proteolytic domain-containing protein; Belongs to the peptidase S16 family. (532 aa)
M4FHE4_BRARPLon proteolytic domain-containing protein; Belongs to the peptidase S16 family. (285 aa)
M4CQG5_BRARPUncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (146 aa)
M4CNK7_BRARPDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (799 aa)
M4CNK6_BRARPDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (507 aa)
M4CKZ8_BRARPElongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (755 aa)
M4D0C6_BRARPLon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. ECO:0000256|PROSITE-. (927 aa)
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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