(69 nodes) Thiolase-like network (Brassica rapa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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protein homology

Your Input:
	M4EAB6_BRARP	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (520 aa)
	M4D4V6_BRARP	3-ketoacyl-CoA synthase. (464 aa)
	M4D509_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (392 aa)
	M4EY04_BRARP	3-ketoacyl-CoA synthase. (526 aa)
	M4F0N9_BRARP	3-ketoacyl-CoA synthase. (474 aa)
	M4F0P0_BRARP	3-ketoacyl-CoA synthase. (506 aa)
	M4F0R3_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (392 aa)
	M4F3N3_BRARP	3-ketoacyl-CoA synthase. (476 aa)
	M4F4J2_BRARP	3-ketoacyl-CoA synthase. (526 aa)
	M4EWE2_BRARP	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (461 aa)
	M4D628_BRARP	3-ketoacyl-CoA synthase. (437 aa)
	M4D8K7_BRARP	3-ketoacyl-CoA synthase. (457 aa)
	M4D9C1_BRARP	3-ketoacyl-CoA synthase. (487 aa)
	M4D9P2_BRARP	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (462 aa)
	M4EWU8_BRARP	3-ketoacyl-CoA synthase. (529 aa)
	M4DCI8_BRARP	Ketoacyl_synth_N domain-containing protein. (175 aa)
	M4DCI9_BRARP	Ketoacyl_synth_N domain-containing protein. (59 aa)
	M4EYN2_BRARP	FAE domain-containing protein. (199 aa)
	M4CX45_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (395 aa)
	M4CYW6_BRARP	3-ketoacyl-CoA synthase. (517 aa)
	M4DHA2_BRARP	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (542 aa)
	M4DKW6_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (894 aa)
	M4DLT8_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (432 aa)
	M4DM34_BRARP	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (470 aa)
	M4DMA9_BRARP	3-ketoacyl-CoA synthase. (482 aa)
	M4DME8_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (392 aa)
	M4DNM2_BRARP	Chal_sti_synt_C domain-containing protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (154 aa)
	M4DQ91_BRARP	3-ketoacyl-CoA synthase. (472 aa)
	M4DVX0_BRARP	3-ketoacyl-CoA synthase. (443 aa)
	M4DVX9_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (456 aa)
	M4DVZ3_BRARP	Chal_sti_synt_C domain-containing protein. (54 aa)
	M4DVZ4_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (394 aa)
	M4DEE9_BRARP	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (461 aa)
	M4DFM3_BRARP	3-ketoacyl-CoA synthase. (529 aa)
	M4DW16_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (403 aa)
	M4DZ82_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (462 aa)
	M4DZT2_BRARP	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (472 aa)
	M4EZQ5_BRARP	3-ketoacyl-CoA synthase. (525 aa)
	M4EUY8_BRARP	3-ketoacyl-CoA synthase. (491 aa)
	M4EQL0_BRARP	3-ketoacyl-CoA synthase. (511 aa)
	M4EPI2_BRARP	3-ketoacyl-CoA synthase. (429 aa)
	M4C8N1_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (392 aa)
	M4CCP4_BRARP	3-ketoacyl-CoA synthase. (507 aa)
	M4CHU4_BRARP	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (546 aa)
	M4CIA1_BRARP	Uncharacterized protein. (747 aa)
	M4EP66_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (451 aa)
	M4EP39_BRARP	ACP_syn_III_C domain-containing protein. (181 aa)
	M4EJ21_BRARP	3-ketoacyl-CoA synthase. (462 aa)
	M4EE21_BRARP	Uncharacterized protein. (404 aa)
	M4EAD0_BRARP	3-ketoacyl-CoA synthase. (506 aa)
	M4FJ67_BRARP	Chal_sti_synt_N domain-containing protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (209 aa)
	M4F8T9_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (425 aa)
	M4F893_BRARP	3-ketoacyl-CoA synthase. (456 aa)
	M4F5P9_BRARP	3-ketoacyl-CoA synthase. (461 aa)
	M4F5F1_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (393 aa)
	M4F528_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (431 aa)
	M4E8B9_BRARP	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (470 aa)
	M4E7J4_BRARP	3-ketoacyl-CoA synthase. (497 aa)
	M4E3T8_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (394 aa)
	M4E2C7_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (460 aa)
	M4E055_BRARP	Uncharacterized protein. (126 aa)
	M4CIK0_BRARP	3-ketoacyl-CoA synthase. (492 aa)
	M4CJX9_BRARP	3-ketoacyl-CoA synthase. (587 aa)
	M4CMT4_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (462 aa)
	M4CPT5_BRARP	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (396 aa)
	M4CYZ8_BRARP	3-ketoacyl-CoA synthase. (463 aa)
	M4CU72_BRARP	3-ketoacyl-CoA synthase. (547 aa)
	M4CUS1_BRARP	3-ketoacyl-CoA synthase. (449 aa)
	M4CVC6_BRARP	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (448 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4C8N1_BRARP	M4DEE9_BRARP	M4C8N1	M4DEE9	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.446
M4C8N1_BRARP	M4EE21_BRARP	M4C8N1	M4EE21	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	Uncharacterized protein.	0.543
M4C8N1_BRARP	M4EWE2_BRARP	M4C8N1	M4EWE2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.446
M4CCP4_BRARP	M4CIK0_BRARP	M4CCP4	M4CIK0	3-ketoacyl-CoA synthase.	3-ketoacyl-CoA synthase.	0.914
M4CCP4_BRARP	M4DFM3_BRARP	M4CCP4	M4DFM3	3-ketoacyl-CoA synthase.	3-ketoacyl-CoA synthase.	0.922
M4CCP4_BRARP	M4E7J4_BRARP	M4CCP4	M4E7J4	3-ketoacyl-CoA synthase.	3-ketoacyl-CoA synthase.	0.586
M4CCP4_BRARP	M4EY04_BRARP	M4CCP4	M4EY04	3-ketoacyl-CoA synthase.	3-ketoacyl-CoA synthase.	0.502
M4CCP4_BRARP	M4EYN2_BRARP	M4CCP4	M4EYN2	3-ketoacyl-CoA synthase.	FAE domain-containing protein.	0.914
M4CCP4_BRARP	M4F4J2_BRARP	M4CCP4	M4F4J2	3-ketoacyl-CoA synthase.	3-ketoacyl-CoA synthase.	0.502
M4CHU4_BRARP	M4DEE9_BRARP	M4CHU4	M4DEE9	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.502
M4CHU4_BRARP	M4EE21_BRARP	M4CHU4	M4EE21	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Uncharacterized protein.	0.995
M4CHU4_BRARP	M4EWE2_BRARP	M4CHU4	M4EWE2	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.502
M4CIA1_BRARP	M4DVZ4_BRARP	M4CIA1	M4DVZ4	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.548
M4CIK0_BRARP	M4CCP4_BRARP	M4CIK0	M4CCP4	3-ketoacyl-CoA synthase.	3-ketoacyl-CoA synthase.	0.914
M4CIK0_BRARP	M4D4V6_BRARP	M4CIK0	M4D4V6	3-ketoacyl-CoA synthase.	3-ketoacyl-CoA synthase.	0.589
M4CIK0_BRARP	M4D9C1_BRARP	M4CIK0	M4D9C1	3-ketoacyl-CoA synthase.	3-ketoacyl-CoA synthase.	0.589
M4CIK0_BRARP	M4DFM3_BRARP	M4CIK0	M4DFM3	3-ketoacyl-CoA synthase.	3-ketoacyl-CoA synthase.	0.922
M4CIK0_BRARP	M4DMA9_BRARP	M4CIK0	M4DMA9	3-ketoacyl-CoA synthase.	3-ketoacyl-CoA synthase.	0.589
M4CIK0_BRARP	M4EAD0_BRARP	M4CIK0	M4EAD0	3-ketoacyl-CoA synthase.	3-ketoacyl-CoA synthase.	0.593
M4CIK0_BRARP	M4EQL0_BRARP	M4CIK0	M4EQL0	3-ketoacyl-CoA synthase.	3-ketoacyl-CoA synthase.	0.593

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