28 items (Brassica rapa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

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Your Input:
	M4CR91_BRARP	Uncharacterized protein. (177 aa)
	M4CX04_BRARP	S1 motif domain-containing protein. (975 aa)
	M4CPX2_BRARP	S1 motif domain-containing protein. (963 aa)
	M4C7K4_BRARP	S1 motif domain-containing protein. (342 aa)
	M4CL84_BRARP	S1 motif domain-containing protein. (342 aa)
	M4CIT0_BRARP	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1594 aa)
	M4CEG0_BRARP	Uncharacterized protein. (167 aa)
	M4CA56_BRARP	S1 motif domain-containing protein. (921 aa)
	M4D0M0_BRARP	Uncharacterized protein. (416 aa)
	M4D1I9_BRARP	Uncharacterized protein. (633 aa)
	EFTS-2	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (1770 aa)
	M4DEQ1_BRARP	Uncharacterized protein. (382 aa)
	M4DHZ6_BRARP	Uncharacterized protein. (488 aa)
	M4DKI8_BRARP	S1 motif domain-containing protein. (429 aa)
	M4DTE5_BRARP	S1 motif domain-containing protein. (730 aa)
	M4DUZ3_BRARP	Uncharacterized protein. (177 aa)
	M4E130_BRARP	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1609 aa)
	M4E4T7_BRARP	S1 motif domain-containing protein. (175 aa)
	M4E5L1_BRARP	Uncharacterized protein. (174 aa)
	M4E8V5_BRARP	Uncharacterized protein. (1171 aa)
	M4EM79_BRARP	S1 motif domain-containing protein. (674 aa)
	M4ET48_BRARP	S1 motif domain-containing protein. (866 aa)
	M4EX57_BRARP	S1 domain-containing protein. (322 aa)
	M4F149_BRARP	Uncharacterized protein. (1930 aa)
	M4F2E9_BRARP	S1-like domain-containing protein. (141 aa)
	M4F4W6_BRARP	Uncharacterized protein. (416 aa)
	M4FC74_BRARP	Uncharacterized protein. (1948 aa)
	M4FG64_BRARP	S1 motif domain-containing protein. (791 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFTS-2	M4CA56_BRARP	M4D3M7	M4CA56	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.	S1 motif domain-containing protein.	0.546
EFTS-2	M4CPX2_BRARP	M4D3M7	M4CPX2	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.	S1 motif domain-containing protein.	0.501
EFTS-2	M4CX04_BRARP	M4D3M7	M4CX04	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.	S1 motif domain-containing protein.	0.501
EFTS-2	M4D0M0_BRARP	M4D3M7	M4D0M0	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.	Uncharacterized protein.	0.861
EFTS-2	M4DEQ1_BRARP	M4D3M7	M4DEQ1	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.	Uncharacterized protein.	0.861
EFTS-2	M4DHZ6_BRARP	M4D3M7	M4DHZ6	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.	Uncharacterized protein.	0.861
EFTS-2	M4ET48_BRARP	M4D3M7	M4ET48	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.	S1 motif domain-containing protein.	0.546
EFTS-2	M4F149_BRARP	M4D3M7	M4F149	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.	Uncharacterized protein.	0.861
EFTS-2	M4F4W6_BRARP	M4D3M7	M4F4W6	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.	Uncharacterized protein.	0.861
EFTS-2	M4FC74_BRARP	M4D3M7	M4FC74	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.	Uncharacterized protein.	0.861
M4C7K4_BRARP	M4CL84_BRARP	M4C7K4	M4CL84	S1 motif domain-containing protein.	S1 motif domain-containing protein.	0.900
M4C7K4_BRARP	M4DKI8_BRARP	M4C7K4	M4DKI8	S1 motif domain-containing protein.	S1 motif domain-containing protein.	0.900
M4C7K4_BRARP	M4F2E9_BRARP	M4C7K4	M4F2E9	S1 motif domain-containing protein.	S1-like domain-containing protein.	0.932
M4CA56_BRARP	EFTS-2	M4CA56	M4D3M7	S1 motif domain-containing protein.	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.	0.546
M4CA56_BRARP	M4D1I9_BRARP	M4CA56	M4D1I9	S1 motif domain-containing protein.	Uncharacterized protein.	0.546
M4CEG0_BRARP	M4CIT0_BRARP	M4CEG0	M4CIT0	Uncharacterized protein.	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	0.798
M4CEG0_BRARP	M4CR91_BRARP	M4CEG0	M4CR91	Uncharacterized protein.	Uncharacterized protein.	0.546
M4CEG0_BRARP	M4DUZ3_BRARP	M4CEG0	M4DUZ3	Uncharacterized protein.	Uncharacterized protein.	0.543
M4CEG0_BRARP	M4E130_BRARP	M4CEG0	M4E130	Uncharacterized protein.	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	0.798
M4CEG0_BRARP	M4E5L1_BRARP	M4CEG0	M4E5L1	Uncharacterized protein.	Uncharacterized protein.	0.546

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