33 items (Brassica rapa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M4DKS9_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (611 aa)
	M4DJ74_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (527 aa)
	M4DGA6_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (601 aa)
	M4DFG6_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (538 aa)
	M4DF32_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (569 aa)
	M4DES0_BRARP	Uncharacterized protein. (313 aa)
	M4DD85_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (663 aa)
	M4DCY2_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (631 aa)
	M4CQ12_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (533 aa)
	M4CT78_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (532 aa)
	M4CTM9_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (673 aa)
	M4CWM1_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (85 aa)
	M4CWU9_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (523 aa)
	M4D9R9_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (558 aa)
	M4C7A3_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (619 aa)
	M4C9Z6_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (530 aa)
	M4CA12_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (539 aa)
	M4CFI1_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (535 aa)
	M4CGM4_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (533 aa)
	M4CK01_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (646 aa)
	M4FDH8_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (533 aa)
	M4CLK4_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (629 aa)
	M4EXM3_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (661 aa)
	M4ERW0_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (601 aa)
	M4EQG5_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (68 aa)
	M4EJP4_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (264 aa)
	M4EA60_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (377 aa)
	M4E804_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (659 aa)
	M4E416_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (535 aa)
	M4E1T9_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (534 aa)
	M4DYQ4_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (674 aa)
	M4DY70_BRARP	Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (551 aa)
	M4DN68_BRARP	Uncharacterized protein. (129 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4CK01_BRARP	M4DJ74_BRARP	M4CK01	M4DJ74	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.402
M4CTM9_BRARP	M4DJ74_BRARP	M4CTM9	M4DJ74	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.408
M4CTM9_BRARP	M4DN68_BRARP	M4CTM9	M4DN68	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	Uncharacterized protein.	0.418
M4DCY2_BRARP	M4DN68_BRARP	M4DCY2	M4DN68	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	Uncharacterized protein.	0.412
M4DD85_BRARP	M4DJ74_BRARP	M4DD85	M4DJ74	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.412
M4DD85_BRARP	M4DN68_BRARP	M4DD85	M4DN68	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	Uncharacterized protein.	0.449
M4DES0_BRARP	M4DN68_BRARP	M4DES0	M4DN68	Uncharacterized protein.	Uncharacterized protein.	0.491
M4DES0_BRARP	M4EJP4_BRARP	M4DES0	M4EJP4	Uncharacterized protein.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.416
M4DES0_BRARP	M4EQG5_BRARP	M4DES0	M4EQG5	Uncharacterized protein.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.556
M4DJ74_BRARP	M4CK01_BRARP	M4DJ74	M4CK01	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.402
M4DJ74_BRARP	M4CTM9_BRARP	M4DJ74	M4CTM9	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.408
M4DJ74_BRARP	M4DD85_BRARP	M4DJ74	M4DD85	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.412
M4DJ74_BRARP	M4DN68_BRARP	M4DJ74	M4DN68	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	Uncharacterized protein.	0.414
M4DN68_BRARP	M4CTM9_BRARP	M4DN68	M4CTM9	Uncharacterized protein.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.418
M4DN68_BRARP	M4DCY2_BRARP	M4DN68	M4DCY2	Uncharacterized protein.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.412
M4DN68_BRARP	M4DD85_BRARP	M4DN68	M4DD85	Uncharacterized protein.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.449
M4DN68_BRARP	M4DES0_BRARP	M4DN68	M4DES0	Uncharacterized protein.	Uncharacterized protein.	0.491
M4DN68_BRARP	M4DJ74_BRARP	M4DN68	M4DJ74	Uncharacterized protein.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.414
M4DN68_BRARP	M4E804_BRARP	M4DN68	M4E804	Uncharacterized protein.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.425
M4DN68_BRARP	M4EJP4_BRARP	M4DN68	M4EJP4	Uncharacterized protein.	Hexosyltransferase; Belongs to the glycosyltransferase 8 family.	0.525

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