33 items (Brassica rapa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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gene fusions

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protein homology

Your Input:
	M4DPD6_BRARP	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
	M4DGN6_BRARP	Uncharacterized protein. (1029 aa)
	M4DIT3_BRARP	AAA domain-containing protein. (340 aa)
	M4DK66_BRARP	Uncharacterized protein. (369 aa)
	M4DM62_BRARP	DNA_pol3_gamma3 domain-containing protein. (938 aa)
	M4DBH5_BRARP	Uncharacterized protein. (790 aa)
	M4DA43_BRARP	AAA domain-containing protein. (1063 aa)
	M4DA07_BRARP	Uncharacterized protein. (742 aa)
	M4D6M3_BRARP	DNA polymerase. (1225 aa)
	M4D0E7_BRARP	AAA domain-containing protein. (354 aa)
	M4CVS1_BRARP	Uncharacterized protein. (248 aa)
	M4CVR3_BRARP	AAA domain-containing protein. (358 aa)
	M4CIR1_BRARP	Uncharacterized protein. (428 aa)
	M4CHK0_BRARP	AAA domain-containing protein. (361 aa)
	M4FCN6_BRARP	DNA_pol_E_B domain-containing protein. (147 aa)
	M4EYW4_BRARP	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (454 aa)
	M4EYU5_BRARP	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (621 aa)
	M4ERZ3_BRARP	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
	M4EI97_BRARP	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (431 aa)
	M4EHD5_BRARP	Uncharacterized protein. (76 aa)
	M4EFR1_BRARP	AAA domain-containing protein. (334 aa)
	M4ECT3_BRARP	Uncharacterized protein. (373 aa)
	M4ECT2_BRARP	AAA domain-containing protein. (708 aa)
	M4ECQ2_BRARP	DNA polymerase. (1329 aa)
	M4EBQ8_BRARP	AAA domain-containing protein. (1025 aa)
	M4E9K2_BRARP	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (458 aa)
	M4E8F5_BRARP	DNA_pol3_gamma3 domain-containing protein. (750 aa)
	M4E7R0_BRARP	DNA_pol3_gamma3 domain-containing protein. (1213 aa)
	M4DVN3_BRARP	Uncharacterized protein. (353 aa)
	M4DUH5_BRARP	Replication factor C subunit 1. (965 aa)
	M4DTZ3_BRARP	Uncharacterized protein. (124 aa)
	M4DRR5_BRARP	MI domain-containing protein. (902 aa)
	M4DN54_BRARP	AAA domain-containing protein. (339 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4CHK0_BRARP	M4CIR1_BRARP	M4CHK0	M4CIR1	AAA domain-containing protein.	Uncharacterized protein.	0.879
M4CHK0_BRARP	M4CVR3_BRARP	M4CHK0	M4CVR3	AAA domain-containing protein.	AAA domain-containing protein.	0.900
M4CHK0_BRARP	M4CVS1_BRARP	M4CHK0	M4CVS1	AAA domain-containing protein.	Uncharacterized protein.	0.984
M4CHK0_BRARP	M4D0E7_BRARP	M4CHK0	M4D0E7	AAA domain-containing protein.	AAA domain-containing protein.	0.999
M4CHK0_BRARP	M4D6M3_BRARP	M4CHK0	M4D6M3	AAA domain-containing protein.	DNA polymerase.	0.828
M4CHK0_BRARP	M4DA07_BRARP	M4CHK0	M4DA07	AAA domain-containing protein.	Uncharacterized protein.	0.979
M4CHK0_BRARP	M4DA43_BRARP	M4CHK0	M4DA43	AAA domain-containing protein.	AAA domain-containing protein.	0.979
M4CHK0_BRARP	M4DBH5_BRARP	M4CHK0	M4DBH5	AAA domain-containing protein.	Uncharacterized protein.	0.979
M4CHK0_BRARP	M4DGN6_BRARP	M4CHK0	M4DGN6	AAA domain-containing protein.	Uncharacterized protein.	0.984
M4CHK0_BRARP	M4DIT3_BRARP	M4CHK0	M4DIT3	AAA domain-containing protein.	AAA domain-containing protein.	0.980
M4CHK0_BRARP	M4DK66_BRARP	M4CHK0	M4DK66	AAA domain-containing protein.	Uncharacterized protein.	0.799
M4CHK0_BRARP	M4DM62_BRARP	M4CHK0	M4DM62	AAA domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.979
M4CHK0_BRARP	M4DN54_BRARP	M4CHK0	M4DN54	AAA domain-containing protein.	AAA domain-containing protein.	0.980
M4CHK0_BRARP	M4DPD6_BRARP	M4CHK0	M4DPD6	AAA domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.987
M4CHK0_BRARP	M4DRR5_BRARP	M4CHK0	M4DRR5	AAA domain-containing protein.	MI domain-containing protein.	0.979
M4CHK0_BRARP	M4DTZ3_BRARP	M4CHK0	M4DTZ3	AAA domain-containing protein.	Uncharacterized protein.	0.580
M4CHK0_BRARP	M4DUH5_BRARP	M4CHK0	M4DUH5	AAA domain-containing protein.	Replication factor C subunit 1.	0.989
M4CHK0_BRARP	M4DVN3_BRARP	M4CHK0	M4DVN3	AAA domain-containing protein.	Uncharacterized protein.	0.996
M4CHK0_BRARP	M4E7R0_BRARP	M4CHK0	M4E7R0	AAA domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.979
M4CHK0_BRARP	M4E8F5_BRARP	M4CHK0	M4E8F5	AAA domain-containing protein.	DNA_pol3_gamma3 domain-containing protein.	0.979

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