(5 nodes) Vesicle transport v-SNARE protein N-terminus network (Brassica rapa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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co-expression

protein homology

Your Input:
	M4FIQ8_BRARP	V-SNARE domain-containing protein. (221 aa)
	M4D7I6_BRARP	V-SNARE domain-containing protein. (222 aa)
	M4EI19_BRARP	SEC7 domain-containing protein. (1675 aa)
	M4F562_BRARP	V-SNARE domain-containing protein. (221 aa)
	M4FJ28_BRARP	V-SNARE domain-containing protein. (250 aa)

Your Current Organism:

Brassica rapa

NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M4D7I6_BRARP	M4F562_BRARP	M4D7I6	M4F562	V-SNARE domain-containing protein.	V-SNARE domain-containing protein.	0.901
M4D7I6_BRARP	M4FIQ8_BRARP	M4D7I6	M4FIQ8	V-SNARE domain-containing protein.	V-SNARE domain-containing protein.	0.902
M4D7I6_BRARP	M4FJ28_BRARP	M4D7I6	M4FJ28	V-SNARE domain-containing protein.	V-SNARE domain-containing protein.	0.545
M4F562_BRARP	M4D7I6_BRARP	M4F562	M4D7I6	V-SNARE domain-containing protein.	V-SNARE domain-containing protein.	0.901
M4F562_BRARP	M4FIQ8_BRARP	M4F562	M4FIQ8	V-SNARE domain-containing protein.	V-SNARE domain-containing protein.	0.900
M4F562_BRARP	M4FJ28_BRARP	M4F562	M4FJ28	V-SNARE domain-containing protein.	V-SNARE domain-containing protein.	0.549
M4FIQ8_BRARP	M4D7I6_BRARP	M4FIQ8	M4D7I6	V-SNARE domain-containing protein.	V-SNARE domain-containing protein.	0.902
M4FIQ8_BRARP	M4F562_BRARP	M4FIQ8	M4F562	V-SNARE domain-containing protein.	V-SNARE domain-containing protein.	0.900
M4FIQ8_BRARP	M4FJ28_BRARP	M4FIQ8	M4FJ28	V-SNARE domain-containing protein.	V-SNARE domain-containing protein.	0.550
M4FJ28_BRARP	M4D7I6_BRARP	M4FJ28	M4D7I6	V-SNARE domain-containing protein.	V-SNARE domain-containing protein.	0.545
M4FJ28_BRARP	M4F562_BRARP	M4FJ28	M4F562	V-SNARE domain-containing protein.	V-SNARE domain-containing protein.	0.549
M4FJ28_BRARP	M4FIQ8_BRARP	M4FJ28	M4FIQ8	V-SNARE domain-containing protein.	V-SNARE domain-containing protein.	0.550

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